Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g0360 ATGGTCGAAACCAGACGGGGCTCGTCTACTTCCAAGCGCTCTCTCTCTTCATCCTCTTCTTCCAACGTGAAACGACCCAAGGTGGCCAAGGATTCTTCGTCAAGAAGTCTGCCGTCAGCGGAAATTCCCGGTACTGCCCACGAGCCTGGAAATGAATCCCAAGAGACGGAGCCATGTCCGGCTAATCTTCCAGATACTGAGTCGAAAAGTATTGACGTTTGTGACTCTGAGCAATCTCCCGCCATGGCCGTCATCGAAGGCGAGGTTTTGACATCGCCGCAGCATCTAGGTGAAACTGCGGTGGAAGGAGAGAAATCAAAGGTGGTTGGAGCGGCCGCCTATGGCCGGTCCAAGAAACGCTCAGCGAAATCAACTAAGACGAGCCCGAAGGCTGCATGGGGAAGGCTTCTTTCTCAGTGTTCCCAGAATCAACATCAATCCTTGTGCACTTCTCAATTCACTGTTGGTCATGGCCGTCAATGCAATTTATGTCTAAATGATCCAGCTGTTAGTAATGTTTTGTGCAAGTTGAAGCTCACCAAGCATGGAGGTTCATCTGTTGGATTACTGGAAATCACAGGGGATAAAGGTGCCGTCCAAGTTAATGGCAGGAATTACAAAAAAAAATCCTGTCTGATACTGAATGCAGGTGATGAGGTGGTCTTCGGTTCTGACAAAAATGGTTATATTTTTCAGCAGCTCATCAACAATAATGTCTCTACTGCTGGGATACCTTGTTCTAATGCTGTTGTTTCATCACAACCTTCTGGCCATGGGGATGATCCTACTGACATGAAGGATGCCACCAATAATGCCAATCCAGCTGAAGCTTCCGCTGAGAAAACTATTCTTGCATCCTCTGCCGATGCCAATGAAAATGTTAGAGTTGACAGCATTAAAGTGGACGTTGGGAGGTTGACAGGGGCCACTGATGAGTTAAGGCCTTTGTTGTGCAAGCTTGCTGGCATGTGTCCTGAATTCAACATAAATGATGGGTTTTCCAAAATATTTGAACAAAGAGAATCAAGAGAACTCTTGAAGGATGTTGATCGTCAAACTAATTTACTTTCCATCAGGCAGCAAGCATTCCAAAACAGTTTACTACAAGGAATCCTCAATCCTGATGATATTGATGTGTCATTTGAAAACTTCCCATATTATATAAGTGATCCAACAAAAAGTGTTTTGATTGCTTCTATGTACATTCATTTGAAGCGAAATGGTTTTACAAAGTTTGCTTCAGGCCTACCTTCACTGTGCCCCCGGATATTGTTATCTGGTCCTGCAGGTTCGGAAATGTATCAGGAAACTTTGTCCAAGGCCCTTGCAAAGCATTTTGGTGCCAGGCTACTAATTGTGGATTCTTTTACCCTGCCTGGTGGAACACCATCAAAGGATTCTGATTCTACTAAACAAAGTTCAAAGCATGAAAAACCATATGTGCTTGAAGAACAGAGTGCCCAGGTTGCCACATTGCATAAGAAACCAACTTCAAGTGTTGATGCTGATCTTATTGATGGATCCTCATTAAGTTCTCAGGTTATGCTGAAGAAGGAGGTATCTACTGCATCATCCAAAGCCCCTGTGCTTAAAACAGGTGACCAAGTGAAATTTGTTGGCAACCTTCCTTCTGCAGTCTCATTATTACAAAATTATCCTTCAAGGGGTCCGAGATATGGCTCCCGGGGCAAAGTCCTTCTTACTTTTGAAGAAAATGAATCTTCAAAAGTTGGGGTTAGATTCGACAAACCAATTCCAGACGGAAATGATCTTGGAGGCCTGTGTGAAGATGATCGTGGGTTTTTTTGTTCAGCTAATCATTTACTACGAGTAGATAGCTCTGGAGGAGATGACACTAACAAGCTTGCTATTAACGAAATCTTTGAGGTTGTTCTTCATCAGAGTAAAAGTGGGGGGTTGGTGTTGTTCTTGAAAGATATAGATAAGACTATGATTGGGAACACAGAACTCTTGAAAAGCAGACTTGAAAGTTTGCCACAAAATGTAGTTGTAATTGGTTCACATACTCTGCTGGACAATCATAAGGACAAGACCCAGCCTGGTAGCCTTCTTTTCACAAAATTCGGGAGCGCTCAGGCAGCTTTACTTGATCTTGCTTTTCCGGATGAGGCTTTGCTCTCTTATTGGAAGCAGCAGTTAGAACATGACAATGAAACTATGAAAGCTCAGTCAAATATTGTCAGCGTGCGCACAGTTCTTGACAAGATTGGATTCATTTGCCCTGATCTAGAAAAACTTTGCATTAAAGATAAAGCCCTAACAACTGAAAGTGTGGAGAAAATTGTTGGCTGGGCATTAAGTTACCAGCTACTGCATTCACCTGAAGACTCAATCAAAGACTCTAAGATTATGTTGTCTACTGAAAGCATTAAGTACGGGCTGGACATTCTACAAGGTACCCATGGAGAAAGCAAGAACTTAAAGACATCACTGAAGGATGTGATTACTGAGAATGAATTCGAGAAAAAATTGCTTGCTGATGTTATTCCTCCAAGTGATATTGGGGTCAAATTTGATGATATTGGAGCTTTAGAAAATGTGAAGGACACCTTGAATGAATTGGTTATGCTTCCCCTTCAGAGGCCCGAATTGTTTTCCAAAGGACAGTTGACGAAGCCTTGCAAGGGAATATTGCTTTTTGGGCCCCCTGGTGTTGGAAAAACAATGCTTGCAAAGGCTGTAGCTACTGAGGCTGGAGCAAATTTCGTCAACATCTCAATGTCCAGCATTACCTCAAAGTGGTTTGGCGAAGGGGAGAAATATGTCAAGGCAGTATTTTCTCTGGCAAGCAAAATTGCTCCTAGTGTTATTTTTGTTGATGAGGTTGATAGTATGTTAGGAAGACGTGAAAATCCTGGTGAGCATGAGGCTATGCGTAAAATGAAGAATGAATTTATGGTGAATTGGGATGGTCTGCGTACAAAAGACACTGAGCGCATACTCGTACTTGCTGCTACAAATAGACCGTTCGACCTTGATGAGGCTGTTATTAGGAGGCTTCCACGAAGATTGATGGTCAATTTGCCAGATGCTCCAAACAGAGAAAAAATTCTTAAAGTAATTTTAGCGAAAGAAGATTTGGCACCTGATGTCGATTTGGAAGCAATATCAAACATGACTGATGGATATTCTGGGAGTGACCTAAAGAATCTTTGTGTCACAGCAGCTCACTGTCCAATAAGGGAGATATTGGAGAAGGAAAAGAAGGAGAGAAGTTTTGCACTGGCTGAGAACAGACCTTTACCTCCATTGTGTAGCAGTACTGACATTCGGCCCTTGAAGATGGAGGACTTTAGATATGCACATGAGCAGGTGGGCGCAAGCGTGTCGTCAGAGTCAACAAATATGAACGAGCTGCTCCAATGGAATGAGCTTTACGGGGAAGGTGGATCCAGAAAGATTAGATCTTTGAGCTATTTTATGTAA 3447 0.4294 MVETRRGSSTSKRSLSSSSSSNVKRPKVAKDSSSRSLPSAEIPGTAHEPGNESQETEPCPANLPDTESKSIDVCDSEQSPAMAVIEGEVLTSPQHLGETAVEGEKSKVVGAAAYGRSKKRSAKSTKTSPKAAWGRLLSQCSQNQHQSLCTSQFTVGHGRQCNLCLNDPAVSNVLCKLKLTKHGGSSVGLLEITGDKGAVQVNGRNYKKKSCLILNAGDEVVFGSDKNGYIFQQLINNNVSTAGIPCSNAVVSSQPSGHGDDPTDMKDATNNANPAEASAEKTILASSADANENVRVDSIKVDVGRLTGATDELRPLLCKLAGMCPEFNINDGFSKIFEQRESRELLKDVDRQTNLLSIRQQAFQNSLLQGILNPDDIDVSFENFPYYISDPTKSVLIASMYIHLKRNGFTKFASGLPSLCPRILLSGPAGSEMYQETLSKALAKHFGARLLIVDSFTLPGGTPSKDSDSTKQSSKHEKPYVLEEQSAQVATLHKKPTSSVDADLIDGSSLSSQVMLKKEVSTASSKAPVLKTGDQVKFVGNLPSAVSLLQNYPSRGPRYGSRGKVLLTFEENESSKVGVRFDKPIPDGNDLGGLCEDDRGFFCSANHLLRVDSSGGDDTNKLAINEIFEVVLHQSKSGGLVLFLKDIDKTMIGNTELLKSRLESLPQNVVVIGSHTLLDNHKDKTQPGSLLFTKFGSAQAALLDLAFPDEALLSYWKQQLEHDNETMKAQSNIVSVRTVLDKIGFICPDLEKLCIKDKALTTESVEKIVGWALSYQLLHSPEDSIKDSKIMLSTESIKYGLDILQGTHGESKNLKTSLKDVITENEFEKKLLADVIPPSDIGVKFDDIGALENVKDTLNELVMLPLQRPELFSKGQLTKPCKGILLFGPPGVGKTMLAKAVATEAGANFVNISMSSITSKWFGEGEKYVKAVFSLASKIAPSVIFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKDTERILVLAATNRPFDLDEAVIRRLPRRLMVNLPDAPNREKILKVILAKEDLAPDVDLEAISNMTDGYSGSDLKNLCVTAAHCPIREILEKEKKERSFALAENRPLPPLCSSTDIRPLKMEDFRYAHEQVGASVSSESTNMNELLQWNELYGEGGSRKIRSLSYFM 1148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele16g0360 1148 MobiDBLite consensus disorder prediction 1 77 - -
Lele16g0360 1148 MobiDBLite consensus disorder prediction 1 40 - -
Lele16g0360 1148 Pfam ATPase family associated with various cellular activities (AAA) 884 1013 IPR003959 GO:0005524|GO:0016887
Lele16g0360 1148 Pfam AAA+ lid domain 1037 1073 IPR041569 -
Lele16g0360 1148 Gene3D - 549 621 - -
Lele16g0360 1148 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 843 1120 IPR027417 -
Lele16g0360 1148 SMART AAA_5 880 1017 IPR003593 -
Lele16g0360 1148 ProSitePatterns AAA-protein family signature. 987 1006 IPR003960 GO:0005524|GO:0016887
Lele16g0360 1148 MobiDBLite consensus disorder prediction 49 63 - -
Lele16g0360 1148 MobiDBLite consensus disorder prediction 250 275 - -
Lele16g0360 1148 SUPERFAMILY SMAD/FHA domain 133 231 IPR008984 GO:0005515
Lele16g0360 1148 Gene3D - 116 238 - -
Lele16g0360 1148 Gene3D - 842 1122 IPR027417 -
Lele16g0360 1148 FunFam p-loop nucleoside triphosphate hydrolase superfamily protein 842 1018 - -
Lele16g0360 1148 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 361 1147 - -
Lele16g0360 1148 Gene3D - 1016 1110 - -
Lele16g0360 1148 CDD AAA 882 1015 - -
Lele16g0360 1148 CDD FHA 151 232 IPR000253 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele16g0360 Lele-ChrLele16 1980685 1991702 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele16g0360 879 1084 Calmodulin-binding Proteins AT3G56690 34.762 3.41e-30 127