Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g0347 ATGATCAGAATATCATCATGTCTCGTGTTTCTTCTGCTAGTGTTCTTGTTTCCTTCTTTCCTGACAAGTACAGGAAATTTGGTGTCTGCAAAAGCGAACAATTATGTCAGAGACGCGTGCTCGGTGACTATGTACCCAGACCTGTGTATCCACTCGCTAGCGTCATTTTCCAGCACTGCCAGAAACAGCCCGAGCAAGTGGGCCCGAGCAGGAGTGTCGGTGACAATATCCGAGGTTAAGAATATTCAAGCACATCTTGCCAAGTTGAAGAGATACCGTCGTCTCAGAGGAAGAAACAGAGCCGCTCTTTCAGATTGTATCGAGACCTTCGCAGATGCGCTCGATGAGCTTCACAGATCACTTGGAGTTCTCAGAAGGCTAAGCAGAAACACGTTCAGTGACCAGATGGATGATCTCAATACATGGATTAGTGCAGCTCTCACTGATGAAGATACATGTCTTGATGGGTTCGAAGGCCAAAAGGAGAGGCAGATTAAATTTCTGCGGAATCAGGTTCAGAAAGTCTCTTATATAACCAGTAACGCTCTTGCTCTAGTAAACAAACTTGCCACTACAGGTCTGGATAGCGTCACTGATCCATAG 603 0.4594 MIRISSCLVFLLLVFLFPSFLTSTGNLVSAKANNYVRDACSVTMYPDLCIHSLASFSSTARNSPSKWARAGVSVTISEVKNIQAHLAKLKRYRRLRGRNRAALSDCIETFADALDELHRSLGVLRRLSRNTFSDQMDDLNTWISAALTDEDTCLDGFEGQKERQIKFLRNQVQKVSYITSNALALVNKLATTGLDSVTDP 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele16g0347 200 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 33 189 IPR035513 -
Lele16g0347 200 TIGRFAM PME_inhib: pectinesterase inhibitor domain 8 189 IPR006501 GO:0004857
Lele16g0347 200 PANTHER PECTINESTERASE INHIBITOR-LIKE 10 185 - -
Lele16g0347 200 FunFam Pectinesterase inhibitor 3 31 190 - -
Lele16g0347 200 Gene3D Invertase/pectin methylesterase inhibitor family protein 30 191 IPR035513 -
Lele16g0347 200 CDD PMEI-like_3 39 191 - -
Lele16g0347 200 Pfam Plant invertase/pectin methylesterase inhibitor 35 185 IPR006501 GO:0004857
Lele16g0347 200 SMART PMEI_2 31 185 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele16g0347 Lele-ChrLele16 1923512 1924114 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele16g0347 28 192 Carbohydrate Esterase AT3G14310 33.529 3.87e-23 94.4