Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g0345 ATGAGCCGCGGGGCAGCAACTGGAGCCAAGGGCAAGAAGAAGGGAGTCAGCTTCGTCATCGACTGTTCGAAGCCGGTCGAAGATAAGATCATGGACGTCGCCTCGCTTGAGAAGTTCCTTCAGGAGAGGATTAAGGTCGGTGGCAAGGCCGGTGCGCTCGGTGACTCCGTCATTGTCACTCGGGACAAGAGCAAGATCACCGTTACTTCCGACAGCAATTTCTCTAAACGGTATTTGAAATATTTGACAAAGAAGTACCTGAAGAAGCATAACGTGAGGGATTGGCTTCGTGTGATTGCGTCCAACAAGGAGCGCAATGTCTACGAGTTAAGATACTTCAACATCGCTGAGAACGAGGGAGAGGAGGAAGACTAG 375 0.5093 MSRGAATGAKGKKKGVSFVIDCSKPVEDKIMDVASLEKFLQERIKVGGKAGALGDSVIVTRDKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKERNVYELRYFNIAENEGEEED 124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele16g0345 124 Pfam Ribosomal L22e protein family 14 122 IPR002671 GO:0003735|GO:0005840|GO:0006412
Lele16g0345 124 Gene3D - 5 124 IPR038526 -
Lele16g0345 124 PANTHER 60S RIBOSOMAL PROTEIN L22 2 124 IPR002671 GO:0003735|GO:0005840|GO:0006412
Lele16g0345 124 FunFam 60S ribosomal protein L22-2 5 124 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele16g0345 Lele-ChrLele16 1916797 1918248 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele16g0345 1 124 Cytoplasmic Ribosomal Protein Gene Family AT3G05560 87.097 1.39e-67 198
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele13g2074 13 27774299 27776190 Lele16g0345 16 1916797 1918248 hybridization
Lele14g2005 14 26115121 26116575 Lele16g0345 16 1916797 1918248 hybridization