Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g0330 ATGGTGTCGCTCAAGTTGCAGAAGCGGCTCGCCGCTAGTGTCCTAAAGTGCGGCAGAGGCAAGGTTTGGCTGGATCCCAATGAAGTCAATGAAATCTCCATGGCCAATTCTCGCCAAAACATAAGGAAGTTAGTGAAGGATGGCTTCATTATCAGGAAGCCAACTAAAATCCACTCTCGATCTCGTGCTCGGCGCATGAAGGAGGCCAAGAGGAAGGGACGCCACTCTGGATATGGTAAGCGTAAGGGTACAAGGGAGGCAAGGCTTCCCACTAAAATCCTCTGGATGAGGAGGATGCGTGTGCTCAGACGCCTGCTTCGCAAGTACAGGGAATCCAAAAAGATTGACAAGCACATGTACCATGATATGTACATGAAGGTGAAGGGTAATGTTTTCAAGAACAAGAGAGTTCTGATGGAGAGCATACACAAATCTAAGGCTGAGAAGGCAAGAGAGAAGACGTTGTCTGACCAATTTGAAGCCAAGCGTGCAAAGAACAAGGCAAGCAGGGAAAGGAAAATGGCCCGGAGAGAGGAGCGCTTGGCTCAGGGTCCAGGAGAGAAGTTACCAGTAGCGCCACCTGCTCCTGCTTCCCAGCCTGCCCAAGTATCAAAGAAATCCAAGAAGTAA 630 0.4968 MVSLKLQKRLAASVLKCGRGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPTKIHSRSRARRMKEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMYHDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKMARREERLAQGPGEKLPVAPPAPASQPAQVSKKSKK 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele16g0330 209 ProSitePatterns Ribosomal protein L19e signature. 7 26 IPR023638 -
Lele16g0330 209 MobiDBLite consensus disorder prediction 57 79 - -
Lele16g0330 209 FunFam Ribosomal protein L19 57 191 - -
Lele16g0330 209 Pfam Ribosomal protein L19e 4 145 IPR000196 GO:0003735|GO:0005840|GO:0006412
Lele16g0330 209 SUPERFAMILY Ribosomal protein L19 (L19e) 3 144 IPR035970 GO:0003735|GO:0005840|GO:0006412
Lele16g0330 209 CDD Ribosomal_L19e_E 4 167 IPR033935 GO:0003735|GO:0022625
Lele16g0330 209 SMART Ribosomal_L19e_2 3 146 IPR000196 GO:0003735|GO:0005840|GO:0006412
Lele16g0330 209 Hamap 50S ribosomal protein L19e [rpl19e]. 3 149 IPR000196 GO:0003735|GO:0005840|GO:0006412
Lele16g0330 209 Coils Coil 161 181 - -
Lele16g0330 209 FunFam Ribosomal protein L19 1 56 - -
Lele16g0330 209 MobiDBLite consensus disorder prediction 57 85 - -
Lele16g0330 209 Gene3D - 2 56 IPR015972 GO:0003735|GO:0005840|GO:0006412
Lele16g0330 209 MobiDBLite consensus disorder prediction 149 184 - -
Lele16g0330 209 Gene3D - 57 187 - -
Lele16g0330 209 PANTHER 60S RIBOSOMAL PROTEIN L19 1 188 IPR039547 GO:0003723|GO:0003735|GO:0022625
Lele16g0330 209 MobiDBLite consensus disorder prediction 149 209 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele16g0330 Lele-ChrLele16 1850800 1852573 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele16g0330 1 209 Cytoplasmic Ribosomal Protein Gene Family AT3G16780 85.167 5.10e-128 357