Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g0327 ATGGCCGCTGATACTCATGTCCCTGCTTCTAAGGTTATTCTCTGCAATGCTGGGGCCGGTGCCGCCGCCGGAGTTATTGCCGCCACATTTGTATGTCCTTTAGACGTCATCAAAACTAGGTTTCAGGTTCATGGGCTTCCACAGCTCGCTAATGGAAGTATTAAAGGCAGTCTAATAGTTGGTAGTTTGGAACAAATATTTCACAAGGAGGGGTTTCGTGGCATGTACCGCGGTCTGGCTCCAACTGTGCTGGCACTACTTCCAAACTGGGCGGTTTATTTTACCATCTATGAGCAGTTTAAGAGCATTCTCAGTTCCGATGATAAACACCATCATCTCTCAATTGGAGCTAATATGTTAGCTGCTTCTGGTGCCGGGGCTGCGACTACCATCGCTACAAATCCACTTTGGGTTGTCAAGACCAGACTTCAAACCCAGGGAATGAGATCTGGGGTTGTGCCTTATAGGAGCACACTATCTGCTCTGACGAGAATTGCTCATGAGGAGGGCATTCGGGGGTTGTACAGTGGCCTTGTACCTGCTCTCGCTGGTATCACTCATGTTGCCATTCAGTTTCCAACATATGAGAAAATAAAATGTTACTTGGCAAACCAAGATAACACAGCCACAGATAAGCTTGGTGCACGTGATGTTGCAATTGCGTCATCAATTTCTAAAATTTTTGCATCCACCTTAACATATCCGCATGAGGTTGTACGATCTAGATTGCAAGAGCAAGGATACCACTCGGAGAGGCGGTATTCTGGTATGGTTGACTGCATTCAGAAGGTGTTTCAGCAAGATGGCCTACCTGGATTTTACCGCGGGTGTGCAACAAACCTGTTGAGGACAACCCCAGCAGCTGTAATCACATTCACCAGCTTTGAAATGATACACCGGTTTCTTGTTTCTCTCTTCCCTTCTGATCCACAAACTCATATATTGTGA 948 0.4641 MAADTHVPASKVILCNAGAGAAAGVIAATFVCPLDVIKTRFQVHGLPQLANGSIKGSLIVGSLEQIFHKEGFRGMYRGLAPTVLALLPNWAVYFTIYEQFKSILSSDDKHHHLSIGANMLAASGAGAATTIATNPLWVVKTRLQTQGMRSGVVPYRSTLSALTRIAHEEGIRGLYSGLVPALAGITHVAIQFPTYEKIKCYLANQDNTATDKLGARDVAIASSISKIFASTLTYPHEVVRSRLQEQGYHSERRYSGMVDCIQKVFQQDGLPGFYRGCATNLLRTTPAAVITFTSFEMIHRFLVSLFPSDPQTHIL 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele16g0327 315 SUPERFAMILY Mitochondrial carrier 16 297 IPR023395 -
Lele16g0327 315 FunFam Nicotinamide adenine dinucleotide transporter 1, chloroplastic 2 109 - -
Lele16g0327 315 ProSiteProfiles Solute carrier (Solcar) repeat profile. 113 201 IPR018108 -
Lele16g0327 315 Pfam Mitochondrial carrier protein 113 204 IPR018108 -
Lele16g0327 315 Pfam Mitochondrial carrier protein 219 303 IPR018108 -
Lele16g0327 315 Pfam Mitochondrial carrier protein 16 106 IPR018108 -
Lele16g0327 315 FunFam NAD+ transporter 110 306 - -
Lele16g0327 315 PANTHER MITOCHONDRIAL NICOTINAMIDE ADENINE DINUCLEOTIDE TRANSPORTER 1-RELATED-RELATED 14 305 IPR044712 GO:0006862|GO:0055085
Lele16g0327 315 Gene3D Mitochondrial carrier domain 11 304 IPR023395 -
Lele16g0327 315 ProSiteProfiles Solute carrier (Solcar) repeat profile. 213 301 IPR018108 -
Lele16g0327 315 PRINTS Mitochondrial carrier protein signature 16 29 IPR002067 GO:0055085
Lele16g0327 315 PRINTS Mitochondrial carrier protein signature 128 146 IPR002067 GO:0055085
Lele16g0327 315 PRINTS Mitochondrial carrier protein signature 78 98 IPR002067 GO:0055085
Lele16g0327 315 PRINTS Mitochondrial carrier protein signature 222 244 IPR002067 GO:0055085
Lele16g0327 315 PRINTS Mitochondrial carrier protein signature 29 43 IPR002067 GO:0055085
Lele16g0327 315 ProSiteProfiles Solute carrier (Solcar) repeat profile. 11 103 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele16g0327 Lele-ChrLele16 1829008 1832131 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele16g0327 1 315 Chloroplast and Mitochondria Gene Families AT2G47490 77.778 4.73e-171 475