Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g0306 ATGGCCTCGGTTCAACGCACTGCAAGCTCGGGATCCGAAGGGGTAGACCCACGATATGCCGGCTTCGATGAGAGAAAGAGAAAGAGGATGCTGTCAAACCGTGAGTCTGCTCGGCGATGCCGGGTGAAGAAGCAAAAGCAACTCGAAGATCTTACAAGCGAAATTAGCCTGCTTAAGGTTGAAAACGGTAAGCTATTTGAGAGCATAAAGGCCAGGGAGGAAGCATACGTTGAGATCGAATCCGTTAACAATGTGTTGAGGGCTCAGACTAGGGAGTTGACCGATCGATTGCGGTTTCTGAACTCGATCCTTGAGATCGCTGAAGAGGTCAGTGGGTTTTCTGTTGAAATCCCTGAGATACCAGATACTCTCTTGAACCCATGGCAGCTTCCTCTTCCAGTGCAGCCGATCATGGCGTCAGCGTTCGACATTATAATGCATTGA 444 0.4955 MASVQRTASSGSEGVDPRYAGFDERKRKRMLSNRESARRCRVKKQKQLEDLTSEISLLKVENGKLFESIKAREEAYVEIESVNNVLRAQTRELTDRLRFLNSILEIAEEVSGFSVEIPEIPDTLLNPWQLPLPVQPIMASAFDIIMH 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele16g0306 147 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 23 86 IPR004827 GO:0003700|GO:0006355
Lele16g0306 147 PANTHER BZIP TRANSCRIPTION FACTOR 44 6 143 - -
Lele16g0306 147 SUPERFAMILY Leucine zipper domain 25 79 IPR046347 GO:0003700|GO:0006355
Lele16g0306 147 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 28 43 IPR004827 GO:0003700|GO:0006355
Lele16g0306 147 Gene3D - 23 78 - -
Lele16g0306 147 Pfam bZIP transcription factor 25 78 IPR004827 GO:0003700|GO:0006355
Lele16g0306 147 SMART brlzneu 21 85 IPR004827 GO:0003700|GO:0006355
Lele16g0306 147 MobiDBLite consensus disorder prediction 1 27 - -
Lele16g0306 147 CDD bZIP_plant_GBF1 26 76 IPR045314 GO:0003700|GO:0006355
Lele16g0306 147 FunFam BZIP transcription factor 23 74 - -
Lele16g0306 147 Coils Coil 41 61 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele16g0306 Lele-ChrLele16 1697420 1697863 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele16g0306 1 144 bZIP Transcription Factor Family AT3G62420 59.184 1.63e-56 171
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lele16g0306 bZIP_1 2.3e-11 CL0018
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele06g0162 06 976751 984770 Lele16g0306 16 1697420 1697863 CCT
Lele07g0361 07 2003319 2010565 Lele16g0306 16 1697420 1697863 CCT
Lele08g0165 08 1007828 1015368 Lele16g0306 16 1697420 1697863 CCT
Lele05g0342 05 1943836 1944676 Lele16g0306 16 1697420 1697863 CCT
Lele13g2119 13 28014597 28015040 Lele16g0306 16 1697420 1697863 hybridization
Lele14g2044 14 26347998 26348441 Lele16g0306 16 1697420 1697863 hybridization