Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g0300 ATGGGCCCGGCCCGTAACACGTTGCCTCAAATGTTCAGCCCACCAAGCTACACTGGGCAAGCATATCCACGTGGCATAAAAGGATTCAGTGTGGCAACGGAGCAGGACCACGCTCGGGACCACGCTGAGCTGCAGCCACTCCTAAAAATATCTCTAAACAGAAAGGCAACGCACGCTACTATGGATGGTACTGCCTCGCCTAAACTTGAGTCAGAAGCATCTCCAGCTCCCACACCAGAAATTCAAGAATCCAAGAAAAGGAAAATGCTTCAGAAAAAAGTTGTGAGGGTGAAAGTTGGAGAAAATGTTAGTAAAGTGAAGAATGAAGGGCTGCCATCGGACTCATGGTCGTGGAGGAAATATGGACAAAAGCCTATTAAAGGATCTCCTTATCCAAGAGGCTATTACAAGTGCAGCACATCCAAAGGTTGTTCGGCCAAAAAGCAAGTAGAGAGGTGCAGAGCAGATGCTTCAATGCTCATTGTCACCTATACTTCTTCCCATAACCATCCAGCTCCAGAATTCAAAGAATCAAAACCTCAAGCAGCTGAGGATCTCTCACTTGATACTTCAAAGGCGAAAGACCAAGACCAAGAGGAACAGAAGAAAGATCTTCAACTGGCAACAGCTAGCGATCGAGGTGCAAGTGAAGAAAATTTTCATTACCTGCAATCGCCGATAGGCTCTTCTGAAGACGTTGTTATTGAACAAGAGGATCTTTTCAAATTGAACCCAGAGAAAACGCAAGAGAGGATAGATCTTCTCTTGGAGGAAGAGCCGCTCTGTTATTCTCAGCTCAAGAACCCCTCAACGCTCAAATCGGAGGAACTTGACTTCTTCGACGAGCTTGAAGAGCTACCCATGTCTCCGTCCTTGTTGGACTTGATGAGGAACAGTTTTCCCGATGAAAGGATTCCAGTTGCCCCGTCATGA 933 0.4652 MGPARNTLPQMFSPPSYTGQAYPRGIKGFSVATEQDHARDHAELQPLLKISLNRKATHATMDGTASPKLESEASPAPTPEIQESKKRKMLQKKVVRVKVGENVSKVKNEGLPSDSWSWRKYGQKPIKGSPYPRGYYKCSTSKGCSAKKQVERCRADASMLIVTYTSSHNHPAPEFKESKPQAAEDLSLDTSKAKDQDQEEQKKDLQLATASDRGASEENFHYLQSPIGSSEDVVIEQEDLFKLNPEKTQERIDLLLEEEPLCYSQLKNPSTLKSEELDFFDELEELPMSPSLLDLMRNSFPDERIPVAPS 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele16g0300 310 Gene3D WRKY domain 97 174 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele16g0300 310 MobiDBLite consensus disorder prediction 165 228 - -
Lele16g0300 310 ProSiteProfiles WRKY domain profile. 107 173 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele16g0300 310 MobiDBLite consensus disorder prediction 172 207 - -
Lele16g0300 310 MobiDBLite consensus disorder prediction 55 91 - -
Lele16g0300 310 SMART WRKY_cls 112 172 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele16g0300 310 SUPERFAMILY WRKY DNA-binding domain 108 173 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele16g0300 310 MobiDBLite consensus disorder prediction 1 20 - -
Lele16g0300 310 FunFam WRKY transcription factor 65 92 173 - -
Lele16g0300 310 Pfam WRKY DNA -binding domain 114 171 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele16g0300 310 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 64 292 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele16g0300 Lele-ChrLele16 1662858 1665412 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele16g0300 84 292 WRKY Transcription Factor Family AT4G01250 42.105 2.64e-40 140
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lele16g0300 WRKY 3.1e-24 CL0274