Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g0291 ATGGGACTTTCTTCACAGCCTTTTTTCCCTGTTTCTTCCCTCTCTTTGAAAGATCAGCTTCAAGAAGACGGAAATTCATCATATGGGTATTTGTGGAGCAAAGTGCTGGCAGGCCGAGGAATGAAGCAGAAGTGGAGGAGTGGGAAGACAAGAAAGGTCTTAATGAAGAGGAGGGGTCGCGTGATAGAAGGTTCTAGAAGACGAGGGGCCATGGGGATTAAGACGAGGATCAGAACTTTGAAGAGGCTTATACCCAGAAGTAACAGCAAATCCATGGGATTGGATGGGCTCTTCAGGGATACAGCCGAGTACATTTTGTCGTTACAAACGAGGGTGAGAGTCATGCAGATTATGGTGGACGTGTTGACAGGATTGAGAGAGATGAACTCAGTTCCTGTTACTTTCGGATGCTTCTTGGGCAATATGTCAGGGTAA 435 0.4644 MGLSSQPFFPVSSLSLKDQLQEDGNSSYGYLWSKVLAGRGMKQKWRSGKTRKVLMKRRGRVIEGSRRRGAMGIKTRIRTLKRLIPRSNSKSMGLDGLFRDTAEYILSLQTRVRVMQIMVDVLTGLREMNSVPVTFGCFLGNMSG 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele16g0291 144 CDD bHLH_AtIBH1_like 62 119 IPR044549 GO:0006355
Lele16g0291 144 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 72 124 IPR036638 GO:0046983
Lele16g0291 144 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 32 122 IPR044660 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele16g0291 Lele-ChrLele16 1621921 1622660 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele16g0291 42 131 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G47270 45.556 8.90e-17 69.3