Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g0290 ATGGCTATGAACCCAGTAATGCGCAAGACAGAAGAAAGCTCTTGGTTTATGGAGAAGAAAGAGATGCGTGTCAAGACGGAGGAAGCAGTTGGATCCACTTCGTTTGGGGATTATAATTCAAACAGTTTCCCACTTTCGAGTGTCTTTGATTTTCATGAAGTGGAAAAGAGCTCTTTAGGGTTTATGGAGTTACTGGGCGTGCAGGAGCGGGACTATGGTTCCATGCTGGATTTGACCCCGCAACTATTTCCTTCTGACCTCAAAAATCATTGTGCCGCTGCAAAAACCTGCTGCGAGCCGTTGAATCAACAGCCCGCCACTCCAAACTCTTCATCAATTTCATCTGCGTCCAGTGAGCCAGCCATTGATGAACAGACTAAAACTGTAGATCAACGAGGACATGAACCGCCAAAGACCAAGAACCAGTTGAAGGCGAAGAAGACAAATAAGAAGAAACAGAGGGAACCGAGATTCGCGTTCATGACGAAAAGCGAGGTCGATCATCTGGATGATGGGTACAGGTGGAGAAAGTACGGTCAAAAAGCTGTAAAGAACAGCCCCTTTCCCAGAAGCTACTATCGTTGCACCAGCTCTTCGTGTAATGTGAAGAAACGAGTGGAACGATCCTTCACTGATCCCAGCATTGTCGTCACGACCTACGAAGGCCAACACACACATCCGAGCCCGCTCATGCCTCGCTCGACTCTCGCCGGAGCTTTGGTACCAGCGGTGGTCTCCGCCGGATGTGGTTCAGCTGTAGCATCGGGGAACTTATCCCAACAGTATCATGAGAAGCTCCAACATCATGATCATCAATTCCTAGCTAGTACATTGTCGTCTTTGGGGTTTCCTCGCATTTGTGGTTCAAAGAATAACATTGCCGCTTTTCCTCAGGACAGAATGCCTTGTAATCCAGGGACCGAAGCTTTTTTAAGGGACCATGGGCTTCTCCAAGATATTATTCCTTCCCATATGTTGAAAGAAGAGTAG 990 0.4758 MAMNPVMRKTEESSWFMEKKEMRVKTEEAVGSTSFGDYNSNSFPLSSVFDFHEVEKSSLGFMELLGVQERDYGSMLDLTPQLFPSDLKNHCAAAKTCCEPLNQQPATPNSSSISSASSEPAIDEQTKTVDQRGHEPPKTKNQLKAKKTNKKKQREPRFAFMTKSEVDHLDDGYRWRKYGQKAVKNSPFPRSYYRCTSSSCNVKKRVERSFTDPSIVVTTYEGQHTHPSPLMPRSTLAGALVPAVVSAGCGSAVASGNLSQQYHEKLQHHDHQFLASTLSSLGFPRICGSKNNIAAFPQDRMPCNPGTEAFLRDHGLLQDIIPSHMLKEE 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele16g0290 329 MobiDBLite consensus disorder prediction 102 156 - -
Lele16g0290 329 MobiDBLite consensus disorder prediction 102 124 - -
Lele16g0290 329 FunFam WRKY transcription factor 57 155 229 - -
Lele16g0290 329 ProSiteProfiles WRKY domain profile. 164 229 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele16g0290 329 Gene3D WRKY domain 154 230 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele16g0290 329 MobiDBLite consensus disorder prediction 125 142 - -
Lele16g0290 329 SUPERFAMILY WRKY DNA-binding domain 161 229 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele16g0290 329 PIRSF WRKY_txn_fact_IIc 17 329 IPR017396 GO:0003700
Lele16g0290 329 Pfam WRKY DNA -binding domain 170 227 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele16g0290 329 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 103 259 IPR044810 GO:0003700
Lele16g0290 329 SMART WRKY_cls 169 228 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele16g0290 Lele-ChrLele16 1614186 1617119 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele16g0290 35 329 WRKY Transcription Factor Family AT2G47260 44.828 8.67e-66 209
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lele16g0290 WRKY 6.3e-27 CL0274
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele06g0151 06 931350 934082 Lele16g0290 16 1614186 1617119 CCT
Lele13g2137 13 28115207 28116535 Lele16g0290 16 1614186 1617119 hybridization
Lele14g2063 14 26443756 26444537 Lele16g0290 16 1614186 1617119 hybridization