Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g0284 ATGGAACATCAAGTGTTTGATTATTCTAACATGAATATCAAGTATAGGGGTGGTGAGATGGCGAGAAGCATATCAGATTGTGGGTCATCGGGAAGTGAAGAAGAGATGGGGATAAAGAAAGGGCCGTGGACAGAGCAAGAGGACGCTATTCTGGCTAACTACATCTCCCTCCATGGCGAAGGACACTGGACCTCTCTCGCTTGCTCCGCAGGACTGAAGCGAACGGGGAAAAGCTGCAGATTAAGATGGTTGAACTACCTGCGTCCCAATGTCCGGCGTGGCAATATAACCCTCCAAGAACAGCTCTTAATCCTTGATCTCCATTCCCGATGGGGCAATAGGTGGTCGAAGATAGCGCAAGAGTTGCCTGGGAGAACAGACAATGAGATAAAGAACTACTGGAGGACGCGAGTGGTGAAGCAGGCCAGACAAATGAAATGCGATGTGAATAGCAAACAGTTTAGAGACGCCTTGCGTTTCGTATGGATTCCTCGCATGGTGGAGCGCATCCAAGCCTCCTCGTCTCGAACAGCATCATCCTGCCACTACTACTCGCCGCTGCATCATACGGAGGCTTCGTCTCTCTCTGATCATTCAATGGCCAGCGCTGACGAAAAAGAAGCCTGCAGCTCAGGGAATCATCCCTTGGAATATTCGCCAGAATTCCAAGCATTTGAAGAAGCCAATGCTGATTTGTGGACCTACGAAAACATATGCTTCTTGCAACAACAGCTTGCCGATGACTCGTGA 750 0.4933 MEHQVFDYSNMNIKYRGGEMARSISDCGSSGSEEEMGIKKGPWTEQEDAILANYISLHGEGHWTSLACSAGLKRTGKSCRLRWLNYLRPNVRRGNITLQEQLLILDLHSRWGNRWSKIAQELPGRTDNEIKNYWRTRVVKQARQMKCDVNSKQFRDALRFVWIPRMVERIQASSSRTASSCHYYSPLHHTEASSLSDHSMASADEKEACSSGNHPLEYSPEFQAFEEANADLWTYENICFLQQQLADDS 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele16g0284 249 FunFam Myb transcription factor 40 92 - -
Lele16g0284 249 SUPERFAMILY Homeodomain-like 36 134 IPR009057 -
Lele16g0284 249 ProSiteProfiles Myb-like domain profile. 35 87 IPR001005 -
Lele16g0284 249 CDD SANT 97 136 IPR001005 -
Lele16g0284 249 ProSiteProfiles Myb-like domain profile. 88 138 IPR001005 -
Lele16g0284 249 CDD SANT 42 87 IPR001005 -
Lele16g0284 249 Pfam Myb-like DNA-binding domain 93 136 IPR001005 -
Lele16g0284 249 Pfam Myb-like DNA-binding domain 40 87 IPR001005 -
Lele16g0284 249 FunFam MYB transcription factor 97 160 - -
Lele16g0284 249 PANTHER MYB TRANSCRIPTION FACTOR-RELATED-RELATED 36 209 IPR044676 GO:0003700|GO:0006355|GO:0043565
Lele16g0284 249 Gene3D - 38 93 - -
Lele16g0284 249 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 92 142 IPR017930 -
Lele16g0284 249 SMART sant 39 89 IPR001005 -
Lele16g0284 249 SMART sant 92 140 IPR001005 -
Lele16g0284 249 Gene3D - 97 138 - -
Lele16g0284 249 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 35 91 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele16g0284 Lele-ChrLele16 1569932 1570877 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele16g0284 38 186 MYB Transcription Factor Family AT1G48000 70.470 1.25e-76 230
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lele16g0284 Myb_DNA-binding 6e-14 CL0123