Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g0282 ATGAAGGTGGAAGGCCAGAGTAAGAGGAAGACACACGAGAGTGAGGATGAGATGGGCTTAAGGAAGGGTCCATGGACTGTGGAAGAGGACACCATTCTGGTCAATTACATCGCCGTCCACGGCGAAGGTCGCTGGAATTCCGTCGCCCGCTGTGCCGGCACGTACTCTGTTCCTTCTCTTTGCATGATTGCGCCTTCAAAGCTGTTGAGGTGGCTGAACTACTTGCGCCCCGACGTTCGGCGTGGGAATATCACGCTGCAGGAACAGATAGTAATTCTTGATCTGCACTCTCGGTGGGGAAATAGGTACGTTAATGAAGGAATACAATACCTGAGGTGGTCGAAGATAGCGCAGCACTTGCCAGGAAGAACAGACAATGAGATTAAGAATTATTGGAGGACGAGAGTGATGAAGCAGGCGAAGCAGCTCAAGTGCGATGTCAACAGCAAGCGGTTCAGGGACACCATGCGTTACGTGTGGATGCCCCGCCTGCTGGAGCGGATACGGGCGGCCGCATCCGAATACGACCCGAACTGCCAACCCATCCCCGTCAGCCCGAATCACCCCTCCGTCGCGCCTCTCGATATGCAGTTCCACCAAGCCCCTGCTCCCCCATGGCAGGCTCATGATGTTTCGGACGGTTCCCCGAACGGGTCCGAAGTTGGGCCAGGGGTTGTATCGGAGCAGGGGAATAATGGCCTGGGTGGGGGTGGCGGTGGTGGGGAGTGTGCCGAAACATTGTGGAGCGACGACAATATTTGGTTTTTGCAACAACTTTTCGAAGATATGTGA 792 0.5505 MKVEGQSKRKTHESEDEMGLRKGPWTVEEDTILVNYIAVHGEGRWNSVARCAGTYSVPSLCMIAPSKLLRWLNYLRPDVRRGNITLQEQIVILDLHSRWGNRYVNEGIQYLRWSKIAQHLPGRTDNEIKNYWRTRVMKQAKQLKCDVNSKRFRDTMRYVWMPRLLERIRAAASEYDPNCQPIPVSPNHPSVAPLDMQFHQAPAPPWQAHDVSDGSPNGSEVGPGVVSEQGNNGLGGGGGGGECAETLWSDDNIWFLQQLFEDM 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele16g0282 263 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 17 50 IPR017930 -
Lele16g0282 263 SMART sant 80 138 IPR001005 -
Lele16g0282 263 SMART sant 21 77 IPR001005 -
Lele16g0282 263 CDD SANT 24 75 IPR001005 -
Lele16g0282 263 CDD SANT 85 134 IPR001005 -
Lele16g0282 263 Pfam Myb-like DNA-binding domain 22 54 IPR001005 -
Lele16g0282 263 Pfam Myb-like DNA-binding domain 81 134 IPR001005 -
Lele16g0282 263 PANTHER MYB TRANSCRIPTION FACTOR-RELATED-RELATED 18 176 IPR044676 GO:0003700|GO:0006355|GO:0043565
Lele16g0282 263 MobiDBLite consensus disorder prediction 1 20 - -
Lele16g0282 263 MobiDBLite consensus disorder prediction 203 241 - -
Lele16g0282 263 Gene3D - 85 136 - -
Lele16g0282 263 ProSiteProfiles Myb-like domain profile. 76 136 IPR001005 -
Lele16g0282 263 Gene3D - 19 81 - -
Lele16g0282 263 SUPERFAMILY Homeodomain-like 19 132 IPR009057 -
Lele16g0282 263 ProSiteProfiles Myb-like domain profile. 17 75 IPR001005 -
Lele16g0282 263 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 76 140 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele16g0282 Lele-ChrLele16 1563504 1564465 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele16g0282 7 260 MYB Transcription Factor Family AT2G47190 47.985 1.81e-72 221
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lele16g0282 Myb_DNA-binding 1.8e-10 CL0123