Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g0267 ATGGAGGAGACCTTTCTTTTCACATCTGAATCTGTCAATGAGGGTCACCCTGACAAATTGTGCGACCAGATCTCTGATGCTGTGCTTGATGCCTGCCTTGAACAGGACCCCGACAGCAAGGTTGCCTGCGAGACATGCACCAAGACCAACATGGTCATGGTCTTTGGAGAGATTACAAGCAAGGCCAATGTAGATTATGAGAAGATTGTCCGCAATACATGCCGCAACATTGGATTTGTCTCTGATGATGTGGGTCTTGATGCTGACAAATGCAATGTATTGGTGAACATTGAGCAACAGAGCCCTGACATTGCCCAGGGCGTGCACGGCCACTTTACTAAGCGTCCAGAGGAGGTTGGTGCTGGTGATCAGGGTCACATGTTTGGCTATGCCACTGATGAAACCCCTGAATACATGCCTTTGAGCCATGTTCTTGCAACCAAATTAGGAGCACGCCTTACTGAGGTTAGGAAGAATGGCACCTGCGCTTGGCTGAGACCAGATGGCAAAACACAAGTAACTGTTGAGTACTACAATGACAATGGTGCTATGGTTCCAGTTCGTGTCCACACTGTCCTTATTTCTACTCAGCATGACGAGACTGTCACTAATGATCAAATTGCTGCTGATCTTAAGGAGCATGTCATCAAGCCTGTCATCCCTGAGAAATACCTAGACGACAAGACCATCTTTCACCTCAACCCCTCTGGACGCTTTGTCATTGGTGGCCCTCATGGGGATGCTGGTCTCACTGGAAGAAAAATTATTATAGATACCTATGGTGGTTGGGGTGCCCACGGTGGTGGCGCTTTCTCAGGGAAGGACCCTACCAAGGTCGATAGAAGTGGTGCCTATGTTGCCAGGCAGGCCGCAAAGAGTGTTGTGGCAAATGGGCTTGCCCGTCGCTGCCTTGTGCAGGTTTCCTACGCCATTGGTGTTCCTGAGCCCTTGTCGGTTTTTATTGACACCTACGAAACTGGAAAGATTCCAGACAAGGAAATTCTTCAACTTGTGCAGGAGAATTTTGACTTCAGGCCTGGAATGATCACCATTAACTTGGACCTCAAGAGGGGTGGCCATAGGTTCCTCAAGACAGCTGCTTATGGACACTTTGGAAGGGATGAGCCAGACTTCACCTGGGAAACTGTGAAGCCACTCAAGTGGCAAAAGTCTCAAGCATAA 1182 0.4882 MEETFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPDSKVACETCTKTNMVMVFGEITSKANVDYEKIVRNTCRNIGFVSDDVGLDADKCNVLVNIEQQSPDIAQGVHGHFTKRPEEVGAGDQGHMFGYATDETPEYMPLSHVLATKLGARLTEVRKNGTCAWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDQIAADLKEHVIKPVIPEKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYVARQAAKSVVANGLARRCLVQVSYAIGVPEPLSVFIDTYETGKIPDKEILQLVQENFDFRPGMITINLDLKRGGHRFLKTAAYGHFGRDEPDFTWETVKPLKWQKSQA 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele16g0267 393 ProSitePatterns S-adenosylmethionine synthase signature 2. 267 275 IPR022631 GO:0004478|GO:0006556
Lele16g0267 393 FunFam S-adenosylmethionine synthase 263 381 - -
Lele16g0267 393 Pfam S-adenosylmethionine synthetase, N-terminal domain 5 102 IPR022628 GO:0004478|GO:0006556
Lele16g0267 393 Gene3D - 12 280 - -
Lele16g0267 393 CDD S-AdoMet_synt 6 384 - -
Lele16g0267 393 SUPERFAMILY S-adenosylmethionine synthetase 116 240 IPR022636 GO:0004478|GO:0006556
Lele16g0267 393 FunFam S-adenosylmethionine synthase 12 128 - -
Lele16g0267 393 TIGRFAM metK: methionine adenosyltransferase 6 387 IPR002133 GO:0004478|GO:0005524|GO:0006556
Lele16g0267 393 FunFam S-adenosylmethionine synthase 135 242 - -
Lele16g0267 393 Pfam S-adenosylmethionine synthetase, central domain 118 239 IPR022629 GO:0004478|GO:0006556
Lele16g0267 393 SUPERFAMILY S-adenosylmethionine synthetase 241 390 IPR022636 GO:0004478|GO:0006556
Lele16g0267 393 SUPERFAMILY S-adenosylmethionine synthetase 4 110 IPR022636 GO:0004478|GO:0006556
Lele16g0267 393 PIRSF MAT 1 393 IPR002133 GO:0004478|GO:0005524|GO:0006556
Lele16g0267 393 Gene3D - 118 381 - -
Lele16g0267 393 Hamap S-adenosylmethionine synthase [metK]. 3 393 IPR002133 GO:0004478|GO:0005524|GO:0006556
Lele16g0267 393 ProSitePatterns S-adenosylmethionine synthase signature 1. 120 130 IPR022631 GO:0004478|GO:0006556
Lele16g0267 393 Pfam S-adenosylmethionine synthetase, C-terminal domain 241 381 IPR022630 GO:0004478|GO:0006556
Lele16g0267 393 PANTHER S-ADENOSYLMETHIONINE SYNTHETASE 3 391 IPR002133 GO:0004478|GO:0005524|GO:0006556
Lele16g0267 393 Gene3D - 5 243 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele16g0267 Lele-ChrLele16 1485172 1486353 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele13g2155 13 28236255 28245063 Lele16g0267 16 1485172 1486353 hybridization
Lele14g2090 14 26571467 26572498 Lele16g0267 16 1485172 1486353 hybridization