Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g0266 ATGAGTACCCTTATAATTGAAAGTGACTGTTGTGAAGTTCTTCATGCAATTCAGAACCGGCTTTCCTTTGAGCAACCGGATCATGAATTAAGGGAGATCCAGAACTTGCTTAAGAGAGATTGGGAAGTTGAACTTGCGTTATGGGACCGAGAATCTAACATAGTTGCTGACGCCATTGCCGCTGAAGCCCGCAATATGCTGGTTGACTGGGTGGTTCTATCTGCTCCTCCGGAAGCTATTTGGCAAGCTCTGCAGAAGGATCTAGACAATATGTCCTTGCTTGTAGACTCTAGTAGCTATTTTTTGTCGATTACGTCCTTGAGAACTGAGATCAGCATGAGAGCTTCCCTCCCCTCAATTGATTTGATCCTCTATCCGTCTTTCCAGTTCAAATTGCCAAATGGAGTCAGTGAGGAGTTGGACAAAATTCCCTGTAATAATACAATCTTTCATTTCAAAGCAAGTCAAGAATCTCAGGCGCTATCCTGCGCACTCCCTCTGCTTAATCTGCGCAATTTTCGCCGGTTTTGGAGCCAAGATCTTCATCTACGCCTTCTTCCAGTTAGTTCCCAGCTCTCTGATCTCTCAACTCCAGTATATTGCCATTTGATTTTAGAACGAATCATGAGTTGTTTCAGCTGTTGCGAAGAGGATGAACTCCACAAAGCTGCTGAGAGTGGAGGACCATACGTGGTAAAAAACTCAACAGGAAACGATGGAAATTATCATGCTTCTGAAACTGCAAAGCAGGGTGCTCAAACTGTCAAAGTCCAGCCCATTGAAGTTCCTGCCATATCAGCGGATGAATTAAAAGAAATTACAGATAATTTTGGGACAGATTCTCTGATTGGGGAGGGGTCCTATGGAAGAGTATATTATGGCGTTCTTAAAAATGGTCTGGCTGCAGCAATCAAGAAGTTAGATGCTAGTAAACAACCTGATGATGAGTTTTTAGCCCAGGTCTCCATGGTATCAAGGCTGAAGCATGAAAATTTTGTTCAATTACTTGGTTATTGTGTTGATGGAAGTTCCCGTGTTCTTGCTTATGAGTTTGCATCTAACGGATCTCTTCACGACATTTTACATGGCAGAAAAGGTGTTAAAGGAGCCCAACCCGGTCCTGTCCTGTCATGGGCGCAGAGAGTAAAGATTGCTGTAGGAGCTGCAAAAGGGCTTGAGTACTTGCATGAGAAGGCTGATCCTCACATTATCCACCGAGACATCAAATCAAGCAATGTACTGATTTTTGATGATGATGTTGGTAAGATTGCAGATTTTGATTTGTCAAATCAGGCTCCTGACATGGCTGCACGTCTTCATTCCACTCGTGTCCTTGGAACCTTTGGTTATCATGCACCAGAGTATGCAATGACTGGACAACTGAATGCTAAAAGTGATGTATACAGCTTTGGCGTGGTCCTTCTGGAACTTTTGACTGGAAGGAAGCCTGTTGATCATACGCTACCTCGTGGACAGCAGAGCCTAGTTACTTGGGCTACACCAAAACTCAGTGAAGATAAAGTCAGGCAGTGTGTTGATACAAGACTAGGAGGAGATTACCCACCCAAAGCTGTTGCTAAGATGGCTGCTGTTGCTGCGCTATGCGTGCAATATGAAGCTGACTTCAGACCAAACATGAGCATTGTAGTCAAAGCTCTTCAACCTTTGTTGAATGCACGACCTGGACCTGCTGGTGAAACTCCAAATTGA 1710 0.4404 MSTLIIESDCCEVLHAIQNRLSFEQPDHELREIQNLLKRDWEVELALWDRESNIVADAIAAEARNMLVDWVVLSAPPEAIWQALQKDLDNMSLLVDSSSYFLSITSLRTEISMRASLPSIDLILYPSFQFKLPNGVSEELDKIPCNNTIFHFKASQESQALSCALPLLNLRNFRRFWSQDLHLRLLPVSSQLSDLSTPVYCHLILERIMSCFSCCEEDELHKAAESGGPYVVKNSTGNDGNYHASETAKQGAQTVKVQPIEVPAISADELKEITDNFGTDSLIGEGSYGRVYYGVLKNGLAAAIKKLDASKQPDDEFLAQVSMVSRLKHENFVQLLGYCVDGSSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWAQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVGKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWATPKLSEDKVRQCVDTRLGGDYPPKAVAKMAAVAALCVQYEADFRPNMSIVVKALQPLLNARPGPAGETPN 569
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele16g0266 569 FunFam pto-interacting protein 1 353 564 - -
Lele16g0266 569 SMART serkin_6 277 557 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele16g0266 569 PANTHER PTO-INTERACTING PROTEIN 1-LIKE 212 561 - -
Lele16g0266 569 Pfam Protein tyrosine and serine/threonine kinase 281 553 IPR001245 GO:0004672|GO:0006468
Lele16g0266 569 SUPERFAMILY Protein kinase-like (PK-like) 256 553 IPR011009 -
Lele16g0266 569 FunFam PTI1-like tyrosine-protein kinase 3 241 351 - -
Lele16g0266 569 ProSitePatterns Serine/Threonine protein kinases active-site signature. 403 415 IPR008271 GO:0004672|GO:0006468
Lele16g0266 569 Gene3D Transferase(Phosphotransferase) domain 1 352 561 - -
Lele16g0266 569 Gene3D Phosphorylase Kinase; domain 1 238 351 - -
Lele16g0266 569 ProSiteProfiles Protein kinase domain profile. 277 557 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele16g0266 569 ProSitePatterns Protein kinases ATP-binding region signature. 283 306 IPR017441 GO:0005524
Lele16g0266 569 Pfam Reverse transcriptase-like 2 63 IPR002156 GO:0003676|GO:0004523
Lele16g0266 569 CDD RNase_H_like 4 60 IPR044730 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele16g0266 Lele-ChrLele16 1477444 1484636 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele16g0266 258 554 Receptor kinase-like Gene Family AT4G02010 50.166 5.21e-89 288
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIII Lele16g0266 PK_Tyr_Ser-Thr 7.1e-45 CL0016