Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g0265 ATGAGCGGGAAATTAATTGTGTCTGCGGTCTCCCTCATCCTCGTGGTGGGGGTGGCGATCGGTGCCGTCGTGGTGGTTCACAACAAGAACAGTGACCCTCAGGTCTCTGAGCGTCAGAATGCGGTGAAGGCAATGTGCCAGAACACGGAGGACCAAAAGCTTTGCCACGACACTCTGGGCAACGTGCAGAACAGCTCAGACCCAAAAGCATTCTTAACCGCCGCCGTGGAAGCCTCCGTCAACAGCCTCATCAAGGCCTTGAACATGAGCGATAAGCTCAGCGTTGAACAGGGCAACAGCACCCCAGGCATCGTCAAGATGGCCACCAATGACTGCAAGGAGTTGCTCGAATTCGCCATGGATAGCCTCCAGGCTTCCAAGGACTTCCTGGGTAACAACAGCGTCCAAACCTTGAACGATCGATCCCCTGACTTCAAGAATTGGCTCGCTTCTGTTGTCTCTTACCAACTGGCTTGCATGGATGGGTTCGACGACAACATCGACGGTGCCAAACAGATCAAGACTCAGCTTCAACAGAATGGTTTGGACGACGTGGGGAAGCTCACCGGCATAGCCCTTGATATTATGGCTGATTTTGAAAACATCCTGGGTCAGTTTGGTTTGAAGGTGAAAGTGAACTCTGGTTCTCGTCGTCTTCTTCAGGTGGACAGCGCAGGCTATCCCACTTGGTTCTCTGCCTCTGATCGGAAGCTCTTGGCCAACGTAAGGCCGAGGGGAAGGGGACATCATATAAAGCCCAACGTAGTGGTGGCCCAGGATGGTAGTGGCCAGTTCAAGACCATCATGGACGCCATTAACTCTTATCCTAAGGGTTTCCAAGGAAGATACATCATCCAAGTCAAGGCCGGTACATACCGTGAGTACGTCACAATTCCCAAGACGGCCGTGAATATCCTTATGTACGGTGACGGCACTGATAAAACCGTCGTCACCGGTAGCAGAAACAATGTTGATGGGTACACCACAAAGGACACAGCTACTTTCGTAAATCTTGGGAACGGGTTCATCGCCAAGTACATGACATTTGTGAACACTGCTGGTCCTGAAAAGCACCAAGCAGTGGCGTTTAGGAACCAGGGAGATATGTCGGCTGCATTCGATTGTTCTTTTGTGGGTTACCAGGACACGTTGTACGCTCAAACCAATCGTCAATTCTACAGGAATTGCGACATCTCCGGCACCGTTGACTTCATATTTGGAGTGTCCACCGTGTTGATCCAGAGCTCTCGAATCATCGTGAGGAAGCCAATGGACAACCAATTCAACACAGTGACGGCTGACGGCAGAAACATGCCGAACATGCCCACAGGAACAGTGATCCAGAACTGTGACATTGTTCCAGAGAATGCTCTCTACCCGGTGAGGTTTCAGATCAGATCGTACCTGGGAAGGCCATGGAAGCAGTATGCTAGAACTGTGGTGATGGAATCCAGAATAGCTGACTTCATTCAACCCGATGGGTGGACTCCATGGGAAGGAAGCTTTTTCCAGAAAACTTTGTACTATGCAGAGTACAACAACGAAGGACCTGGTGCTAATCTGTCCAAGAGGGTTAAGTGGCCGGGTTACAAGGGCCTCATCAGTAAGAATGAAGCCGCTCAGTTCACCGCCGGCCAATTCCTCAAAGGCGGGCCCACTTCCCGATCTGAGGACTGGATGAAGCCCCTTCATGTTCCTTTAGACATTGGCTTCACCAAGCCTTGA 1725 0.5113 MSGKLIVSAVSLILVVGVAIGAVVVVHNKNSDPQVSERQNAVKAMCQNTEDQKLCHDTLGNVQNSSDPKAFLTAAVEASVNSLIKALNMSDKLSVEQGNSTPGIVKMATNDCKELLEFAMDSLQASKDFLGNNSVQTLNDRSPDFKNWLASVVSYQLACMDGFDDNIDGAKQIKTQLQQNGLDDVGKLTGIALDIMADFENILGQFGLKVKVNSGSRRLLQVDSAGYPTWFSASDRKLLANVRPRGRGHHIKPNVVVAQDGSGQFKTIMDAINSYPKGFQGRYIIQVKAGTYREYVTIPKTAVNILMYGDGTDKTVVTGSRNNVDGYTTKDTATFVNLGNGFIAKYMTFVNTAGPEKHQAVAFRNQGDMSAAFDCSFVGYQDTLYAQTNRQFYRNCDISGTVDFIFGVSTVLIQSSRIIVRKPMDNQFNTVTADGRNMPNMPTGTVIQNCDIVPENALYPVRFQIRSYLGRPWKQYARTVVMESRIADFIQPDGWTPWEGSFFQKTLYYAEYNNEGPGANLSKRVKWPGYKGLISKNEAAQFTAGQFLKGGPTSRSEDWMKPLHVPLDIGFTKP 574
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele16g0265 574 Gene3D - 248 570 IPR012334 -
Lele16g0265 574 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 39 197 IPR035513 -
Lele16g0265 574 CDD PMEI-like_3 44 197 - -
Lele16g0265 574 FunFam Pectinesterase 248 571 - -
Lele16g0265 574 SUPERFAMILY Pectin lyase-like 250 552 IPR011050 -
Lele16g0265 574 Pfam Plant invertase/pectin methylesterase inhibitor 41 195 IPR006501 GO:0004857
Lele16g0265 574 SMART PMEI_2 37 195 IPR006501 GO:0004857
Lele16g0265 574 ProSitePatterns Pectinesterase signature 2. 398 407 IPR033131 -
Lele16g0265 574 PANTHER PECTINESTERASE 18 561 - -
Lele16g0265 574 TIGRFAM PME_inhib: pectinesterase inhibitor domain 24 167 IPR006501 GO:0004857
Lele16g0265 574 Pfam Pectinesterase 254 550 IPR000070 GO:0030599|GO:0042545
Lele16g0265 574 Gene3D Invertase/pectin methylesterase inhibitor family protein 37 199 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele16g0265 Lele-ChrLele16 1473658 1475478 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele16g0265 1 571 Carbohydrate Esterase AT2G47030 40.826 1.10e-136 408