Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g0257 ATGGATCACAACCCTCGTCCCAGTCGTGAAATGACCTTCTTCAGCTCCGGCGACTTCCTTCCCCATAATTCAGATCCCACAACCGAGAATCCCGGCTCCCACCTCCATCCTCCCATCAAAGAAATGGATTTCTTCTCCCGTTCAGTTGACAAAAGCTGCGATTCTAGCCCGCCGCCTCATCAGGATCCGGATCATGATGGAAATGGATCGGTTCCTTCCACTGATCGGCCTGTAAACACCGGCCTAAATCTAACGAGTGTAAGTTCTGGAAAGTCAGTCGCGGCAAATAATGAAAATCCTAATACCGAGCTGAGTACAATCCAAGGCGAATTATGGAGACTTCATGCAGAGAACAGGAAGTTGAGAACTATGCTCGACCAGATCACAAAAAACTACAGCCAACTACAAGCTCAGGTGTTCATCGCTTTGCAAAAACAAAACCCTATGAAGGTTGAAGAAAATGGTATAGTGTCGGGGAAACAGTTGATGGACCCACGGCCATCTACCAATGTAGACATCAATGATGCATCGATTTCCGATGATAAGACTCAATCAGTTTCGGCGCCCTCAAACAATGCGGAGGTAATGTCAAACCAACGTGAACATCATTTGACTAAACTTCTTGGGAAGCGAGCTTGTCCTGAAGATGGTTTTGACCAATACTCTCAGAGTTGGGAGTCATCCATCAGCACCAAGTTACAAGAATCCAAGAGATCAGACGAACAAGCTTCGGATCAGGTGCCCTTCAGGAAAGCCAGGGTTTCCGTACGTGCGAGATCAGAAGCTCCTCTGATAAGCGATGGATGCCAATGGAGAAAATATGGTCAAAAAATGGCAAAAGGCAATCCTTGCCCTCGTGCTTATTATCGTTGCACTATGGCCATAGGATGCCCAGTTCGCAAGCAGGTGCAAAGGTGTGCCGAGGACAAGACAGTGCTGATAACAACCTACGAAGGAAATCACAACCACCCTCTTCCTCCGGCAGCCACTGCTATGGCGAATACAACATCGGCGGCTGCCGCGATGGTCCTTTCCAGTTCAACCTCAAGTACGAACAAGGAAGGCTTAACACATTCTGCGGGATACATGTGTTCGATGGCCTATCCCTACGCATCAATGGCCACACTATCAGCGTCTGCCCCATTTCCAACTATCACCCTCGACTTGACACAAGTCCCCAACGCCATGCAGCTGCAACGAGCACATGCCTCATCGGGGTCCCCTTTTCCAATGCCGGTAATGTTGCATGGGTGTCCTCGGGGACAGCTAACAGGACATCCCATGATGTTCCCACAGAACTTGCTTCAATTAGGGCAAAGGCTGCCTTCGAATTCGTCATCTATGGTTGAGACGGTGACTGCTGCCATTACTTCTGATCCCAATTTGACTGCAGCACTGGCGGCTGCAATATCATCCATCATAGGGGCGTCCGGTGGCGGCGGAGCAGCGGGTAATAACACGGTTGCTGCAAGTAGCGAAGGTGCTATAAATATTCCAAGTAATGCCTTTAACCCCATTCCTGTGCTGCCTGTCTCCCCGCGGCAACTTCCTCGTTCATGCACTACGCTCTCCCCCAACTAG 1581 0.4972 MDHNPRPSREMTFFSSGDFLPHNSDPTTENPGSHLHPPIKEMDFFSRSVDKSCDSSPPPHQDPDHDGNGSVPSTDRPVNTGLNLTSVSSGKSVAANNENPNTELSTIQGELWRLHAENRKLRTMLDQITKNYSQLQAQVFIALQKQNPMKVEENGIVSGKQLMDPRPSTNVDINDASISDDKTQSVSAPSNNAEVMSNQREHHLTKLLGKRACPEDGFDQYSQSWESSISTKLQESKRSDEQASDQVPFRKARVSVRARSEAPLISDGCQWRKYGQKMAKGNPCPRAYYRCTMAIGCPVRKQVQRCAEDKTVLITTYEGNHNHPLPPAATAMANTTSAAAAMVLSSSTSSTNKEGLTHSAGYMCSMAYPYASMATLSASAPFPTITLDLTQVPNAMQLQRAHASSGSPFPMPVMLHGCPRGQLTGHPMMFPQNLLQLGQRLPSNSSSMVETVTAAITSDPNLTAALAAAISSIIGASGGGGAAGNNTVAASSEGAINIPSNAFNPIPVLPVSPRQLPRSCTTLSPN 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele16g0257 526 Gene3D WRKY domain 250 327 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele16g0257 526 Pfam WRKY DNA -binding domain 267 324 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele16g0257 526 MobiDBLite consensus disorder prediction 1 101 - -
Lele16g0257 526 MobiDBLite consensus disorder prediction 72 101 - -
Lele16g0257 526 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 92 482 IPR044810 GO:0003700
Lele16g0257 526 SUPERFAMILY WRKY DNA-binding domain 258 326 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele16g0257 526 ProSiteProfiles WRKY domain profile. 260 326 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele16g0257 526 SMART WRKY_cls 265 325 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele16g0257 526 Coils Coil 118 138 - -
Lele16g0257 526 FunFam probable WRKY transcription factor 31 250 327 - -
Lele16g0257 526 MobiDBLite consensus disorder prediction 17 31 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele16g0257 Lele-ChrLele16 1428225 1430731 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele16g0257 87 474 WRKY Transcription Factor Family AT4G04450 42.787 2.97e-85 268
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lele16g0257 WRKY 5.4e-24 CL0274