Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g0250 ATGGCAATGAAGCTGATTTTGATAGTCATTGGTTTGGCTCTCTTCATTTCTGGGGTTATCTCCATTGGATCTGAGACACATTCTGCGTTTTCTCACTTAGAGAATGATTTCGTTGCCGCAAAAGCTTCCTCTTCGCCCCAACCTCTCATGGTCGCCCTCACTCTCATTCAAGGAGCTGCTTCTAAGGGAGCTGTCTGTTTGGATGGAACACTGCCTGCTTACCACTTGCACCGTGGATTCGGATCTGGGGCTAATAGCTGGCTCATTCAACTGGAGGGTGGAGGGTGGTGTAATACCATCAGGAGTTGTGTTTTTAGAAAAACTACTCGTCGTGGTTCCTCAAATCACATGGAAAAGCAAATACCATTCACGGGAATTTTGAGCAATAAAGCTGAAGAAAACCCTGATTTCTTCAACTGGAACAGAGTCAAGTTACGATATTGTGATGGAGCATCATTCAGTGGGGACAGCGAGGACACGAGTGCACAACTTCAATACAGAGGACAAAAAATATGGCTGGCTGCTATGGAGGAGTTAATGTCCAAGGGAATGCAGAATGCGAACCAGGCCCTTCTCTCTGGATGCTCTGCGGGTGGCCTGGCATCCATTATACATTGTGATGAATTCCGGGGCTTGTTTCCTAAATCTACCAAAGTGAAATGTTTGAGTGATGCAGGGCTTTTTCTTGACGCAATTGATGTATCTGGAGGACGCACATTGAGGAATCTATATGGAGGTGTTGTTAAATTACAGGAAGTACAAAAGAATCTGCCACAAAGTTGCCTCAAAAAACTGGATCCAACTTCGTGCTTCTTTCCTCTGAATTTGATCGACCACGTTCAGACCCCTTTGTTTATACTCAATGCGGCCTATGATGCATGGCAGCTCCAAGCCAGTTTAGCACCGCCTTCAGCTGACCCGCATGGCTCTTGGAATAACTGCAAATCAAACCACGCAAACTGTAATTCATCTCAAATTCAGTTCCTCCAAGACTTCAGAAATCAAATGCTTAATGCTTTGAATGGTTTCTCACAGTCATCTCAAACTGGATTATACATAAATTCTTGTTTTGCTCATTGCCAATCTGAGAGACAGGATACTTGGTTTGCTGATGACTCTCCCCTGATTAAGAACAAGCCAATTGCAATAGCTGTTGGAGACTGGTATTTTGATCGACAAGTTGTCAAAGCTATTGACTGTGCATACCCCTGTGACAAGACCTGCCATAATCTGGTCTTCAAGTGA 1245 0.4434 MAMKLILIVIGLALFISGVISIGSETHSAFSHLENDFVAAKASSSPQPLMVALTLIQGAASKGAVCLDGTLPAYHLHRGFGSGANSWLIQLEGGGWCNTIRSCVFRKTTRRGSSNHMEKQIPFTGILSNKAEENPDFFNWNRVKLRYCDGASFSGDSEDTSAQLQYRGQKIWLAAMEELMSKGMQNANQALLSGCSAGGLASIIHCDEFRGLFPKSTKVKCLSDAGLFLDAIDVSGGRTLRNLYGGVVKLQEVQKNLPQSCLKKLDPTSCFFPLNLIDHVQTPLFILNAAYDAWQLQASLAPPSADPHGSWNNCKSNHANCNSSQIQFLQDFRNQMLNALNGFSQSSQTGLYINSCFAHCQSERQDTWFADDSPLIKNKPIAIAVGDWYFDRQVVKAIDCAYPCDKTCHNLVFK 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele16g0250 414 Pfam Pectinacetylesterase 45 394 IPR004963 GO:0016787
Lele16g0250 414 PANTHER NOTUM-RELATED 39 410 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele16g0250 Lele-ChrLele16 1384956 1388476 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele16g0250 2 414 Carbohydrate Esterase AT2G46930 68.269 0.0 604
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele06g0104 06 636936 637712 Lele16g0250 16 1384956 1388476 CCT
Lele07g0303 07 1663604 1664402 Lele16g0250 16 1384956 1388476 CCT
Lele08g0105 08 621733 622509 Lele16g0250 16 1384956 1388476 CCT
Lele05g0285 05 1601042 1603837 Lele16g0250 16 1384956 1388476 CCT
Lele13g2170 13 28335414 28338924 Lele16g0250 16 1384956 1388476 hybridization
Lele14g2108 14 26671919 26676620 Lele16g0250 16 1384956 1388476 hybridization