Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g0232 ATGCATGGTGGTACCACTACCTCTTGCAAAGTCATACAACAACATATTAAGATCGACAATCTTTTATTTCTTGGTACCTTGGAAGTATTTCTTGGAAAGTGTTGAATTCTAAGCAATGATGCTGCTCAAAATCCAGATTTTTACAATTGGAATAGAGTGAAGATTCGTTATTGTGATGGTGCCTCTTTTGCTGGGGATGGCGAAGATAAGAATGCACAGCTGCAATTCAGAGGACAGCGTATTTGGTTGGCTGCAATGGAAGAATTGATGTCAAAGGGAATGCGATATGCCAACCAGGCTTTTCTTACTGGATGCTCTGCTGGTGGTTTGGCCACTATTATTCACTGTGATGAATTTCGAAGTCTATTTCCAACGACCACCAAAGTGAAGTGTCTTAGTGATGCTGGGTTATTTCTTGATGCGTAA 426 0.4061 MHGGTTTSCKVIQQHIKIDNLLFLGTLEVFLGKCXILSNDAAQNPDFYNWNRVKIRYCDGASFAGDGEDKNAQLQFRGQRIWLAAMEELMSKGMRYANQAFLTGCSAGGLATIIHCDEFRSLFPTTTKVKCLSDAGLFLDA 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele16g0232 141 Pfam Pectinacetylesterase 35 141 IPR004963 GO:0016787
Lele16g0232 141 PANTHER NOTUM-RELATED 35 141 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele16g0232 Lele-ChrLele16 1294228 1295552 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele16g0232 36 140 Carbohydrate Esterase AT3G05910 74.286 2.32e-56 176