Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g0209 ATGGCATCTTTGGAATCAATTGTAGATCCTGTTAGTTCAGAGACGTGCCCAGAAGGCAATCATAGAAAGATTAGGACAATCGGGCACGATGTCAGCAACGATCAGAATTCGCTCGCTCCGGTTCCGTGGAGATCCGAGACAGAGCAGCGGACCTATTCCTCCAAGCTCGTCGAAGCTCTCCGCCGCGTTCTTCGCCAGAGTCCTACTTCCACTGCCAAGCCTCGCCTAGGACGTGATGTTCGTGAGATTGCTGACAGGGTTCTAGCGGTGACGGCGAAAGGCAGGACTCGGTGGAGTCGGGCGATACTGGCCTCTCCGCTCAGTCGGAGAAAGTTCCAGAGGCAGCATAGGAAGGTCAAGAAGGCGGCGAACGGATTGAAGAAACCAGAGGTTAGAAGAGAGAGAAGAAGGCTGCCGGCCGTGCAGAGGAAAGCGCGAGTCCTCAACCGGTTAGTTCCCGGTTGCCGGAAGGTCTCGTTTCCGAGTCTTCTGGAAGAAACCAGTGATTATATTTCGGCCATGGAAATGCAAGTGCGGGCCATGACGGCACTCACTGAACTACTCGGAGGTGGCGAGCCGGCCGACCGGCTCGGGCTGCCTTGA 603 0.5605 MASLESIVDPVSSETCPEGNHRKIRTIGHDVSNDQNSLAPVPWRSETEQRTYSSKLVEALRRVLRQSPTSTAKPRLGRDVREIADRVLAVTAKGRTRWSRAILASPLSRRKFQRQHRKVKKAANGLKKPEVRRERRRLPAVQRKARVLNRLVPGCRKVSFPSLLEETSDYISAMEMQVRAMTALTELLGGGEPADRLGLP 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele16g0209 200 MobiDBLite consensus disorder prediction 118 137 - -
Lele16g0209 200 CDD bHLH_AtIBH1_like 132 185 IPR044549 GO:0006355
Lele16g0209 200 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 44 188 IPR044660 GO:0006355
Lele16g0209 200 MobiDBLite consensus disorder prediction 1 22 - -
Lele16g0209 200 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 125 174 IPR011598 GO:0046983
Lele16g0209 200 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 127 188 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele16g0209 Lele-ChrLele16 1179154 1179756 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele16g0209 43 184 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G17100 51.899 6.35e-38 129
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele05g0227 05 1270686 1271294 Lele16g0209 16 1179154 1179756 CCT
Lele16g0209 16 1179154 1179756 Lele16g0209 16 1179154 1179756 ECH
Lele13g2211 13 28502072 28502680 Lele16g0209 16 1179154 1179756 hybridization
Lele14g2149 14 26889353 26891456 Lele16g0209 16 1179154 1179756 hybridization