Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g0205 ATGGTTATTGATACGGCCGCCCTCTCTATCTATTCTTTCAAATTTTCGGTTCGCCAAGCTTCTCTATCGTCGACGTCTTCCGCTCGAATTCGCCATCGCTTCCCTTCTAGCCGATGGTTGAACTTTAATCATCGTTGTGCCTCTCATAGGTTTGACTGTTCAAGATGTTCAATAACAAATACCGATATACAATTGGATCATGTCACAACCGATGAGGTTCAAGGAGAGTCATCAACTGTTGAACCTAATTGTCCGGTGCCAGTAGTTAAACTCAACTCTGATATTCTTGAGACTGAGTCCCTGAATCTACTGACTGAAGGCACATATGTAGATAGCCTCTTGACAGCATTACCTGTTTTGTCGGAAAAGGAGCAGCATGTCCTTGCAGCTACACCAGCTCACCCAGCTGCATTATACGCTTTCTACGCAAACTGCATAGCTGGAAATTTAGTTGAACAGCTTTGGAATTTCGCTTGGCCTTCTGCCATTGCCTTGATTCATCCAAGCCTTTTACCTGTTGCGGTAATGGGTTTTTTCACCAAAGTTGCTATAATTGTTGGAGGCCCCCTGGTTGGGAAATTTATGGACCATTTTCCCAGAATATCTGCATATAATTGCTTGAATATCATTCAGGCGGCTGCGCAGTTGCTGTCTGCGTCAATGATCATTCATGCTCATTCTGTCCGTCCTACCTCTGTGACTTCCATGCTTCTATGCCCATGGTTTGTCATATTAGTTTCAGCTGGGGCTATTGAAAGGCTATGTGGTGTTGCAGTGGGGGTTGCAAATGAACGTGACTGGGTTGTATTGCTGGCAGGAGTGAATAGGCCAATTGCACTTGCACAGGCAAATGCAGTACTAAATCGAATTGATCTCATGTGTGAGATAGTTGGGGCATCACTTTTTGGAGCTCTCCTTTCTAAGTTTCATCCAGTAACCTGCTTGAAATTTGCTGCTGGCTTAATGATGGGATTACTTCCTGTTACAATTGCACTCACATGGCTGGCTAACAAGCTCTCCGCTGGGGTTCTTGACCGGCCTAAATCTTCACAAACTTGTTGCAGAGTATTCACTGAAGATTCTGGGCCACATGCTTACAATATAGTTGTTAAAGGTGTAGAAGCCATAAAGCTTGGCTGGAAGGAATATCTGGGCCAGCCAGTTCTTCCAGCAAGTCTTTCGTGGGTGCTCCTATACTTCAATGTTGTTCTTGGACCAGGAAGTTTGATGACAGCATTTTTAACACAGCGTGGATTACATCCCTCTATCATTGGAGGATTCAGCGGATTGTGTGCTTTTATGGGCGTTGCTGCAACATTTGTGTCTTCAAATCTGGTCAAACAATTTGGCATTTTAAAGGCTGGGGCAGTTGGATTGGTTTTTCAAGCTTTACTTCTCAGCATGGCTGTTGCTGTATATTGGAGTGGATCAATTTCCCAACAAAGCCCACTTCTTTTATTCTTGTCATTGATTATATTGTCACGGTTGGGACACATGTCATATGATGTTGTTGGTGCTCAGATTATTCAGACGGGGATCCCATCATCCAAAGCAAATCTCATAGGGACGACAGAGGTTGCTGTTGCTAGTTTGGCAGAGTCTATAATGCTGGGAGTTGCCATAATTGCAAATGACCCTTCTCATTTTTGGTTTTTGGCAATGTTGTCTCTTCTATCTGTGGTTGGAGCAGCATGGATGTTTTGCACATGGTTGTTTAATCCAACAGATGAACACAAAAACCTTTTTTCTTATGATCCTCAATTTTGA 1767 0.4346 MVIDTAALSIYSFKFSVRQASLSSTSSARIRHRFPSSRWLNFNHRCASHRFDCSRCSITNTDIQLDHVTTDEVQGESSTVEPNCPVPVVKLNSDILETESLNLLTEGTYVDSLLTALPVLSEKEQHVLAATPAHPAALYAFYANCIAGNLVEQLWNFAWPSAIALIHPSLLPVAVMGFFTKVAIIVGGPLVGKFMDHFPRISAYNCLNIIQAAAQLLSASMIIHAHSVRPTSVTSMLLCPWFVILVSAGAIERLCGVAVGVANERDWVVLLAGVNRPIALAQANAVLNRIDLMCEIVGASLFGALLSKFHPVTCLKFAAGLMMGLLPVTIALTWLANKLSAGVLDRPKSSQTCCRVFTEDSGPHAYNIVVKGVEAIKLGWKEYLGQPVLPASLSWVLLYFNVVLGPGSLMTAFLTQRGLHPSIIGGFSGLCAFMGVAATFVSSNLVKQFGILKAGAVGLVFQALLLSMAVAVYWSGSISQQSPLLLFLSLIILSRLGHMSYDVVGAQIIQTGIPSSKANLIGTTEVAVASLAESIMLGVAIIANDPSHFWFLAMLSLLSVVGAAWMFCTWLFNPTDEHKNLFSYDPQF 588
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele16g0205 588 SUPERFAMILY MFS general substrate transporter 138 575 IPR036259 -
Lele16g0205 588 Pfam Ferroportin1 (FPN1) 137 560 IPR009716 GO:0005381|GO:0016020|GO:0034755
Lele16g0205 588 CDD MFS_SLC40A1_like 140 570 IPR009716 GO:0005381|GO:0016020|GO:0034755
Lele16g0205 588 PANTHER SOLUTE CARRIER FAMILY 40 MEMBER 128 582 IPR009716 GO:0005381|GO:0016020|GO:0034755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele16g0205 Lele-ChrLele16 1163032 1167323 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele16g0205 157 582 Organic Solute Cotransporters AT5G03570 23.297 5.09e-18 85.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele16g0205 16 1163032 1167323 Lele06g0041 06 301712 302434 CCT
Lele16g0205 16 1163032 1167323 Lele08g0040 08 272628 279519 CCT
Lele13g2217 13 28514554 28518843 Lele16g0205 16 1163032 1167323 hybridization
Lele14g2152 14 26899718 26908835 Lele16g0205 16 1163032 1167323 hybridization