Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g0190 ATGGATCCGGAGGGAGGATCCAACGACGGTTCTAGCTACTACTCCATCCTCGGGATTCCTAGGAACGCCTCCTTCTCCGATGTCCGCACCGCCTATCGGAATCTCGCTCTGTGGCACCCGGACAGATGGGCTGGAAACATTGCAATAATTGGGGAAGCCAAACGGCGATTCCAGCAAATTCAAGAAGCTTACTCGGTTCTTTCCGATCAGTCCAAAAGGTCAATGTACGACGCTGGACTCTACGATCTTTTAGAAGAAGAAGACGAAGAATTCTGTGATTTCATGAACGAAATGATCTCGATGATGAACAATGTGAAGGACGAGGGGAACAGTTTGGAAGATCTACAAAGGATGTTCGTAGAAATGGTTGGTGGAGATGAGACGAGCTTCGAGTCGAAGGATGATCAAACGAGCGGCAAGAGAGGACGTGTCAGTGCACCAAGAGGCAACGCAGCTAAGCGCAGCAACTGTCGCCGCTAG 480 0.5021 MDPEGGSNDGSSYYSILGIPRNASFSDVRTAYRNLALWHPDRWAGNIAIIGEAKRRFQQIQEAYSVLSDQSKRSMYDAGLYDLLEEEDEEFCDFMNEMISMMNNVKDEGNSLEDLQRMFVEMVGGDETSFESKDDQTSGKRGRVSAPRGNAAKRSNCRR 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele16g0190 159 ProSitePatterns Nt-dnaJ domain signature. 57 76 IPR018253 -
Lele16g0190 159 SMART dnaj_3 11 72 IPR001623 -
Lele16g0190 159 ProSiteProfiles dnaJ domain profile. 12 80 IPR001623 -
Lele16g0190 159 MobiDBLite consensus disorder prediction 126 159 - -
Lele16g0190 159 MobiDBLite consensus disorder prediction 127 141 - -
Lele16g0190 159 CDD DnaJ 13 69 IPR001623 -
Lele16g0190 159 SUPERFAMILY Chaperone J-domain 9 81 IPR036869 -
Lele16g0190 159 PRINTS DnaJ domain signature 52 72 IPR001623 -
Lele16g0190 159 PRINTS DnaJ domain signature 14 32 IPR001623 -
Lele16g0190 159 PANTHER PUTATIVE, EXPRESSED-RELATED 8 138 - -
Lele16g0190 159 Pfam DnaJ domain 13 77 IPR001623 -
Lele16g0190 159 Gene3D DnaJ domain 3 102 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele16g0190 Lele-ChrLele16 1086137 1087434 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele16g0190 13 84 C2H2 Transcription Factor Family AT1G74250 37.838 4.02e-10 55.5