Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g0189 ATGGACAATATCAGAGAAAATTCATCATACTGTTGTGATGTGAGTCTCGGACCTTGGGAGAAATTTAATGCAGATGATGAGTTATGGAGGGATGAAGATGGAGGAACCAGGGATTTTTTTTTGGGGGGGCTGTTCATCATGCCATGCCCTGTGGTGGCTGCAGAAACCCATCAAAACCATTCCCCTCAACAAGCACCCTCTGCTTCTCACTCTCCTCCGTCTTCAGCGCTCTCTTTAATCATTGAGTTGTTCCCTCATCTTCAAATTCAAACTAGTGGCACTTCCGCAAATGTGAGCCGATCCAGGTCCTGTTTCCTCGCGACCTGTCGTCCCCCTTTCTTACATGAGGACGCTTCCTCTTGCTTTTTACGCCCTTTCAAACCCCGAGAACGACTAAACCCCGACTTCCCTCTCTCCCTCACTCCTTCTCGCGCTCCCCATCCTTCTCGACATATCCGAAACCCTACGGTTCCCCAAACGTGCAAAATCGCTGATTACTTTCACTCGCTCTCACTACGTATTGTTAATATGTCGTATCGCCCTCCCGGTAACTCCAGGACCGAGGTCCGTCGTAATCGATACAAGGTCGCCGTAGATGCCGAGGAAGGTCGTAGACGGCGAGAGGATACCATGGTCGAGATCCGAAAGAACCGTAGAGAAGAGAGTTTGCAGAAGAAGAGGCGCGAGGGCCTTCAAGCTCAGCAGATGCCCTCTTCAATACACTCTACTGCCGTAGAGAAGAAGTTGGAACACCTGCCATCCATGGTTGCAGGCGTTTGGACAGATGATCACAACCTGCAGCTTGAGTCGACAACTCAGTTTCGGAAGTTGCTTTCAATTGAGCGTAGCCCACCAATTGAGGAGGTTATTCAAGCTGGTGTAGTTCCTCGCTTTGTTGAATTTTTGATGAGAGAAGATTTTCCACAGTTGCAGTTTGAGGCAGCTTGGGCCTTGACGAATATAGCTTCTGGAACATCTGAAAACACTAAAGTGGTGATTGATCATGGTGCTGTGCCAATTTTTGTCAAACTGCTTGGTTCTCCAAGTGATGATGTCCGCGAACAGGCCGTGTGGGCATTAGGAAATGTTGCTGGGGATTCTCCCAGGTGCCGTGATCTTGTTCTCAGTCATGGGGCCTTGGTTCCTCTGCTGACACAGTTGAATGAGCAAGCTAAGCTTTCTATGCTTAGAAATGCTACCTGGACGCTATCAAATTTCTGCAGGGGCAAGCCACAACCTCCTTTTGAACAGGTAAAACCTGCGCTCCCTGCTCTTGCCCGTCTTATCTACTCAAATGATGAAGAAGTCTTGACTGATGCTTGCTGGGCACTTTCATATCTTTCTGATGGTACAAATGACAAAATTCAAGCTGTAATTGAATCCGGTGTATGTGGTCGGCTTGTTGAGCTTTTGTTGCATCCATCCCCTTCTGTGCTTATTCCTGCTCTTCGTACAGTTGGAAATATTGTCACTGGAGATGATATGCAAACTCAGTTCATAATCAATCATCAGTCACTTCCTTGTCTTTTGAACCTATTAACAAACAACTATAAAAAAAGCATAAAGAAGGAAGCCTGTTGGACCATATCAAATATCACAGCTGGGAATAAACAGCAGATTCAGGCTGTAATCGAGGCTAATATAATTGGTCCGCTCGTTCACCTTCTTCAAAATGCTGAGTTTGATATTAAGAAAGAGGCAGCTTGGGCTATCTCTAATGCTACATCTGGTGGATCTCATGATCAAATCAAGTACCTGGTAAGTCAGGGGTGTATTAAGCCCTTGTGTGATCTTCTCATCTGCCCTGATCCTAGAATTGTGACTGTCTGTCTGGAGGGGCTCGAAAACATCTTGAAGGTGGGAGAAGCTGATAAAAACATGGGTAATAATGGGGGTGTGAATCTATATGCCCAACTGATTGATGATGCTGAGGGTTTGGAGAAAATTGAGAATCTACAGAGTCATGATAACACTGAGATTTATGAGAAGGCAGTGAAAATTCTGGAGACATATTGGTTGGAGGAAGAAGATGAGACTATGCCTCCTCCAGGGGATAATGCCCAGTCAGGGTTCAACTTTGGTGGCCCTGAGGTTCCTGCTGTGCCTTCTGGGGGATTCAACTTTAATTGA 2130 0.4629 MDNIRENSSYCCDVSLGPWEKFNADDELWRDEDGGTRDFFLGGLFIMPCPVVAAETHQNHSPQQAPSASHSPPSSALSLIIELFPHLQIQTSGTSANVSRSRSCFLATCRPPFLHEDASSCFLRPFKPRERLNPDFPLSLTPSRAPHPSRHIRNPTVPQTCKIADYFHSLSLRIVNMSYRPPGNSRTEVRRNRYKVAVDAEEGRRRREDTMVEIRKNRREESLQKKRREGLQAQQMPSSIHSTAVEKKLEHLPSMVAGVWTDDHNLQLESTTQFRKLLSIERSPPIEEVIQAGVVPRFVEFLMREDFPQLQFEAAWALTNIASGTSENTKVVIDHGAVPIFVKLLGSPSDDVREQAVWALGNVAGDSPRCRDLVLSHGALVPLLTQLNEQAKLSMLRNATWTLSNFCRGKPQPPFEQVKPALPALARLIYSNDEEVLTDACWALSYLSDGTNDKIQAVIESGVCGRLVELLLHPSPSVLIPALRTVGNIVTGDDMQTQFIINHQSLPCLLNLLTNNYKKSIKKEACWTISNITAGNKQQIQAVIEANIIGPLVHLLQNAEFDIKKEAAWAISNATSGGSHDQIKYLVSQGCIKPLCDLLICPDPRIVTVCLEGLENILKVGEADKNMGNNGGVNLYAQLIDDAEGLEKIENLQSHDNTEIYEKAVKILETYWLEEEDETMPPPGDNAQSGFNFGGPEVPAVPSGGFNFN 709
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele16g0189 709 PANTHER IMPORTIN ALPHA 190 678 - -
Lele16g0189 709 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 293 336 IPR000225 GO:0005515
Lele16g0189 709 FunFam Importin subunit alpha 189 228 - -
Lele16g0189 709 FunFam Importin subunit alpha 250 673 - -
Lele16g0189 709 Pfam Armadillo/beta-catenin-like repeat 325 364 IPR000225 GO:0005515
Lele16g0189 709 Pfam Armadillo/beta-catenin-like repeat 580 617 IPR000225 GO:0005515
Lele16g0189 709 Pfam Armadillo/beta-catenin-like repeat 494 534 IPR000225 GO:0005515
Lele16g0189 709 Pfam Armadillo/beta-catenin-like repeat 283 323 IPR000225 GO:0005515
Lele16g0189 709 Pfam Armadillo/beta-catenin-like repeat 536 575 IPR000225 GO:0005515
Lele16g0189 709 Pfam Armadillo/beta-catenin-like repeat 421 448 IPR000225 GO:0005515
Lele16g0189 709 Pfam Armadillo/beta-catenin-like repeat 367 408 IPR000225 GO:0005515
Lele16g0189 709 Pfam Armadillo/beta-catenin-like repeat 452 490 IPR000225 GO:0005515
Lele16g0189 709 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 420 462 IPR000225 GO:0005515
Lele16g0189 709 Gene3D - 189 228 IPR036975 GO:0006606
Lele16g0189 709 SMART arm_5 366 408 IPR000225 GO:0005515
Lele16g0189 709 SMART arm_5 451 491 IPR000225 GO:0005515
Lele16g0189 709 SMART arm_5 325 365 IPR000225 GO:0005515
Lele16g0189 709 SMART arm_5 282 323 IPR000225 GO:0005515
Lele16g0189 709 SMART arm_5 536 576 IPR000225 GO:0005515
Lele16g0189 709 SMART arm_5 579 619 IPR000225 GO:0005515
Lele16g0189 709 SMART arm_5 493 534 IPR000225 GO:0005515
Lele16g0189 709 SMART arm_5 410 449 IPR000225 GO:0005515
Lele16g0189 709 ProSiteProfiles IBB domain profile. 174 236 IPR002652 GO:0006606|GO:0061608
Lele16g0189 709 Pfam Atypical Arm repeat 634 680 IPR032413 -
Lele16g0189 709 SUPERFAMILY ARM repeat 190 677 IPR016024 -
Lele16g0189 709 Gene3D - 250 673 IPR011989 -
Lele16g0189 709 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 336 378 IPR000225 GO:0005515
Lele16g0189 709 Pfam Importin beta binding domain 190 272 IPR002652 GO:0006606|GO:0061608
Lele16g0189 709 MobiDBLite consensus disorder prediction 218 239 - -
Lele16g0189 709 MobiDBLite consensus disorder prediction 134 155 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele16g0189 Lele-ChrLele16 1078713 1083866 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele13g2238 13 28609309 28615981 Lele16g0189 16 1078713 1083866 hybridization
Lele14g2171 14 26984703 26986333 Lele16g0189 16 1078713 1083866 hybridization