Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g0171 ATGGGCCTTCTCGACCAACTGTGGGATGATACGGTCGCCGGACCTCAGCCGGAGAACGGTCTCGGAAAGCTCCGAAAGCACAAGACCTTCAGTACCGTCCGAGCTGGGTCCGGCAAGGAATCATATGAGGGAAGCGCGAGATCGTACGACGAGGAATCGGTGGAGGCGTTGAGAGTAACGCGTCGCATCATGATCGTAAAACCACCAGGGTACCAGAGTGGATCGCCTCCAGTTTCACCTGCCGGTTCTACTCCACCGGTGTCTCCGTTTTCGGGAGCAAAAGAGTCTTTCCGGTTTCGTAGAAGGTCGACCTCAGATGCGTACGAGAAGCCGAGTCAGAGCAGATCATCAAGCTCTTCTTCTCCTTTCGATGTCTGA 378 0.5529 MGLLDQLWDDTVAGPQPENGLGKLRKHKTFSTVRAGSGKESYEGSARSYDEESVEALRVTRRIMIVKPPGYQSGSPPVSPAGSTPPVSPFSGAKESFRFRRRSTSDAYEKPSQSRSSSSSSPFDV 125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele16g0171 125 MobiDBLite consensus disorder prediction 109 125 - -
Lele16g0171 125 MobiDBLite consensus disorder prediction 1 53 - -
Lele16g0171 125 Pfam Dormancy/auxin associated protein 7 85 IPR008406 -
Lele16g0171 125 MobiDBLite consensus disorder prediction 67 125 - -
Lele16g0171 125 PANTHER DORMANCY-ASSOCIATED PROTEIN 1 1 120 IPR008406 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele16g0171 Lele-ChrLele16 1017505 1018761 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele16g0171 16 1017505 1018761 Lele05g0203 05 1095429 1096886 CCT
Lele16g0171 16 1017505 1018761 Lele06g0011 06 66882 68312 CCT
Lele16g0171 16 1017505 1018761 Lele07g0206 07 1104465 1105912 CCT
Lele16g0171 16 1017505 1018761 Lele08g0012 08 62693 64118 CCT
Lele13g2250 13 28677737 28680628 Lele16g0171 16 1017505 1018761 hybridization
Lele14g2184 14 27029900 27033086 Lele16g0171 16 1017505 1018761 hybridization