Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g0158 ATGGCTTCTGCTTCTGTGGCTTTAAGCTCCTTCTTCTTCTCCGTCATCATCTTCCTCTTGATGTTTCTATCTTTTCAAAGAACCCGCATTTTGTCTGTGGATGCTCTGTTTCACCCGGCAGGAAACTTCCATGTCCATGTCCTATCAGTGAACGGACAAGAAAATGACAACCAGGTTAAGGAAATCTCTGGACAAGATGAGAATGATGGCAAGGGGCTTCTGATAATGGAAAAGTTCAGAGCTTTGCTCGGACTCTACAGTTTCCAAACCAGAAGGCTATCCAATGGCGATTCCGAGTTTCTCTCTCCATCACCTTCTCCTTCACCTAGCATTGAACTTGAGCCTCCATCCCCGTCTCCATCGCCATCTCAATCTCCATCTCCTCTTCCGTTACCTCATGTGTTTGTTCATCCCTTTCCTCCACGGCATCGTCCCCGCTTTAATCCATCAGCTCGCAAGTTTCAACATAAAGATAGAGGCAGAGCTCAAGCAATTCTAGTAGCTGTTCTTGCGTCTGTTGGGGTTGCTACAGTGATTAGTGCTCTTGGGCTTATCTGGTTTTTCAGAAAATGCAGAAAGCATGCAAGGAAACCCAAAAGGACAATGACACTCTGCAGCAAGAACGGAGGAAGCGGAGGTTCTTATGAGAACTCGTCAAGTCAGGTGGGTTCGAACTCTGCCATAGATCTATTTTATCTGAATGCTTTAGGCGATGATATAGGGCAACACACCTGCAGCTTGAAACAGACTTCTGAAACCGTAAATACAAGCTCGAATCATAGCTCCATCCCAAAATGTGCAGTTTATGAGAAGATGGAATTAAATCAAGAAGTGATCAGTTCAGGATATGATAATGCTAGCAGTTCTTCCACGAAGGAAATTCTATCTATTCATGAGGATGCTGAATCAGCGAAAGATGAATCCGAATCTGATGGTGATGGGGATAAAATTATTACCATGGAACGCCATTCATCAGAGACTGAGAGTTTTCATTCCTGCGCCGATTCCCACTCGTCAAATGTCAGAATTTCCGATGCTTCTCCGGGAAGTATGGCTGAGACTCTGTCTCCGTCTCCTCGAGCATCTCAGTCTAATTCTATCAGTTCGTCGATTCCATTCACGAAGGAAATTCCTCATTCGCCCCAAACTTCAACTTCAAAGATAGAAGAATCTCCTCAATCACCATGCATTGCAAAGCAGAAAGAGCAAAAGATTGAATCTTGTTCACGACGTCCCAAAGCCACAACGCCTCCACAGCCGCCGCCACCGCCACCCCCGCCGCCACCTCCAACTCTACAAATACCATTGTTTTCTTTGCATTCTCTTACTTCTTCATCAAGAATTCCCTCCGACTCTCCGCTTTCTTCATCATCTCCAAGAAACTCGGATTCTAACTCAGCATTGAATCGAAGTGGAGAAAATGAGTCGCCTCGTCCTCCTCAACCTCCTCCTGCAAGATCGCCACCTACCATTCCCCCACCACCATGTCCACCACCGCCCTTCAAAGGTAATAATAACAATGTGAAAACTCCACCTCCTCCGCCATCTCAGCTTCCCCAGTTTACGCCTCTGGGAAAAGATGGAGTCCCGCTACCAAAACTTAAACCACTACACTGGGACAAAGTAAGAGCTGCCCCGGATCGGACGATGGTTTGGGACAAGCTTCGAACAAGCTCATTTGAGTTTGATGAGGAAATGATCGAGTCACTTTTTGGCTACAATTTGCAAAATTCAATGAAGAACGACGAGACAAAGAGCAAAAGTCCTTCTCCAAGCAAACACCTACTCGAGCCAAAGAGGCTGCAGAACATTACTATTCTCTCAAAAGCTCTGAATGTGACGGCTGAACATGTATGTGAAACCCTAATACAAGGTAAGGGCCTCGCTTTACAACAGCTAGAGGCACTGGTGAAGATGGTGCCCACCAAGGAAGAAGAGGATAAGCTCTTGAATTATAAAGGAGACATCAATGATTTGGGATCCGCTGAAAAGTTTGTAAGAGCAATGCTGAGTATACCCTTTGCCTTTCAACGTTTTGAAGCCATGCTTTACAGGGAAACCTTTGAGGATGAGATTGTCCACCTCAGGAACTCTTTTTCAATGCTCGAGGATGCGTGCAAGGAACTAAGATCAAGTAGGCTCTTCTTGAAATTACTTGAAGCTGTGCTGAAAACAGGAAACCGTATGAATGTTGGGACAATAAGAGGAGGTGCCCGAGCATTCAAGCTCGATGCCCTTCTCAAGCTAGCTGATGTTAAGGGAACTGATGGGAAAACTACGTTACTCCATTTTGTTGTTCAGGAGATTGTTCGATCAGAAGGAATCAGAGTTTCGGATAGCATTATGGGGAAAATCAGCCAGAAAAGTAAGAACAGGACAGAAGAAGAGAAGGAAGATGATTACAGAAGAATGGGATTAGAACTTGTTTCTGGTTTGAGTACTGAGCTATACAACGTAAAGAAGACAGCGACAATCGACTTGGACGTTCTCGCCAGCTCTGTCTCAAACCTAAAAGACGGAATGGCTAAGCTGCAATATCTGGTGCAGGAGTTACATACGGATGAAAAAAGTGAGAACTTTGTGAATTCGATGAAGGCTTTCCTAAATTATGCAGGGAGAAATGTAAGGGAGCTGCAAGGAGATGAAGATAGGGTGCTAGCTCGTGTGAAAGAAATCACAGAGTACTTTCATGGGGATGTGAGCAAAGAAGACGCAAATCCACTTCGGATATTTGTGATTGTAAGAGATTTTATGGGAATGTTGGATAATGTATGTAAAGAACTCAGGAGGTGCCAAGCTCCCCGCACACCAAATCCTCTCGCTCCATTCAAGTAG 2835 0.4494 MASASVALSSFFFSVIIFLLMFLSFQRTRILSVDALFHPAGNFHVHVLSVNGQENDNQVKEISGQDENDGKGLLIMEKFRALLGLYSFQTRRLSNGDSEFLSPSPSPSPSIELEPPSPSPSPSQSPSPLPLPHVFVHPFPPRHRPRFNPSARKFQHKDRGRAQAILVAVLASVGVATVISALGLIWFFRKCRKHARKPKRTMTLCSKNGGSGGSYENSSSQVGSNSAIDLFYLNALGDDIGQHTCSLKQTSETVNTSSNHSSIPKCAVYEKMELNQEVISSGYDNASSSSTKEILSIHEDAESAKDESESDGDGDKIITMERHSSETESFHSCADSHSSNVRISDASPGSMAETLSPSPRASQSNSISSSIPFTKEIPHSPQTSTSKIEESPQSPCIAKQKEQKIESCSRRPKATTPPQPPPPPPPPPPPTLQIPLFSLHSLTSSSRIPSDSPLSSSSPRNSDSNSALNRSGENESPRPPQPPPARSPPTIPPPPCPPPPFKGNNNNVKTPPPPPSQLPQFTPLGKDGVPLPKLKPLHWDKVRAAPDRTMVWDKLRTSSFEFDEEMIESLFGYNLQNSMKNDETKSKSPSPSKHLLEPKRLQNITILSKALNVTAEHVCETLIQGKGLALQQLEALVKMVPTKEEEDKLLNYKGDINDLGSAEKFVRAMLSIPFAFQRFEAMLYRETFEDEIVHLRNSFSMLEDACKELRSSRLFLKLLEAVLKTGNRMNVGTIRGGARAFKLDALLKLADVKGTDGKTTLLHFVVQEIVRSEGIRVSDSIMGKISQKSKNRTEEEKEDDYRRMGLELVSGLSTELYNVKKTATIDLDVLASSVSNLKDGMAKLQYLVQELHTDEKSENFVNSMKAFLNYAGRNVRELQGDEDRVLARVKEITEYFHGDVSKEDANPLRIFVIVRDFMGMLDNVCKELRRCQAPRTPNPLAPFK 944
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele16g0158 944 ProSiteProfiles Formin homology-2 (FH2) domain profile. 524 944 IPR015425 -
Lele16g0158 944 MobiDBLite consensus disorder prediction 476 520 - -
Lele16g0158 944 SMART it6_source 524 936 IPR015425 -
Lele16g0158 944 MobiDBLite consensus disorder prediction 436 475 - -
Lele16g0158 944 MobiDBLite consensus disorder prediction 323 534 - -
Lele16g0158 944 MobiDBLite consensus disorder prediction 108 135 - -
Lele16g0158 944 MobiDBLite consensus disorder prediction 414 434 - -
Lele16g0158 944 SUPERFAMILY Formin homology 2 domain (FH2 domain) 537 932 - -
Lele16g0158 944 Pfam Formin Homology 2 Domain 530 921 IPR015425 -
Lele16g0158 944 Gene3D Formin, FH2 domain 548 936 IPR042201 -
Lele16g0158 944 MobiDBLite consensus disorder prediction 97 135 - -
Lele16g0158 944 PANTHER FORMIN-RELATED 451 936 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Lele16g0158 944 MobiDBLite consensus disorder prediction 331 400 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele16g0158 Lele-ChrLele16 945378 948800 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele16g0158 509 944 FH2 protein (formin) Gene Family AT3G05470 74.318 0.0 671
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele16g0158 16 945378 948800 Lele13g2267 13 28790602 28795113 CCT
Lele16g0158 16 945378 948800 Lele14g2203 14 27134674 27137374 CCT
Lele16g0158 16 945378 948800 Lele15g0145 15 870825 875340 CCT
Lele16g0158 16 945378 948800 Lele16g0158 16 945378 948800 ECH
Lele13g2258 13 28738731 28742075 Lele16g0158 16 945378 948800 hybridization
Lele14g2194 14 27089954 27093750 Lele16g0158 16 945378 948800 hybridization