Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g0148 ATGGGTTGCTGTTGCGACGAAGACGACTGCGACATCCTCAAACATCTCATGAATTCCCATTTCCCCTCTTCCTCCGTCGAATCACCCCGCCCTTCCTCCCCCTGCTTTTCCTCTTCCACTGTTATTTCCCCAATCAATTCTCATTTCCCTGCCCTAGCCTGCAGGGACACCCTCCGACTCATCTTCCTCAAACTTCCCATCCCTGACCTTGCTCGCGCCTGCTGCGTTTCCCGACTCTGGAACGCCGTTGCTTCCGAGAGGGATATTGTGACTAGGGCCTTTCTTTCTCCTTGGAATTTGAAGGACATAATCGGCACTCCACTCTCGGGAAGCTTCTGGAGGGACAATGGTTTGGGGAAATTTGCCCTCTCCCATCGAATTGGCCGTGGGGACAGTGTTGCCAGCCTTGCCGTCAAATACTCGGTTCAGGTCATGGACATAAAGCGTCTGAACAACATGATGAGTGATCATGGTATATACTCAAGGGAAAGGTTATTGATCCCCATAAGCAATCCTGATATTCTTATAAACAGAACATGCTATATTGAGCTAGATGTCTACGCAAAAAGAGAAGTAGCAGTGTTGTATCCAGATGACGTGCCAGACAGAAGAACAAGCTATTTATCCAACAGAATGTCCTCAGAAGGCAAGAAAAGAATAATTAATTCCTTAAGGAGAAGCATGCAAGTTGATGATGAAACTGCAAAATACTACTGGTATATTTCAGATGGGAATCCTCGAGCGGCTCTCTCTGAATTTACGGATGACCTTCAATGGGAGAGGCAGGTAGGTCTTTCCTAG 801 0.4744 MGCCCDEDDCDILKHLMNSHFPSSSVESPRPSSPCFSSSTVISPINSHFPALACRDTLRLIFLKLPIPDLARACCVSRLWNAVASERDIVTRAFLSPWNLKDIIGTPLSGSFWRDNGLGKFALSHRIGRGDSVASLAVKYSVQVMDIKRLNNMMSDHGIYSRERLLIPISNPDILINRTCYIELDVYAKREVAVLYPDDVPDRRTSYLSNRMSSEGKKRIINSLRRSMQVDDETAKYYWYISDGNPRAALSEFTDDLQWERQVGLS 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele16g0148 266 Gene3D LysM domain 120 173 IPR036779 -
Lele16g0148 266 SUPERFAMILY F-box domain 56 105 IPR036047 GO:0005515
Lele16g0148 266 Pfam LysM domain 125 168 IPR018392 -
Lele16g0148 266 ProSiteProfiles LysM domain profile. 123 167 IPR018392 -
Lele16g0148 266 CDD LysM 124 167 IPR018392 -
Lele16g0148 266 Gene3D - 55 89 - -
Lele16g0148 266 SMART LysM_2 124 168 IPR018392 -
Lele16g0148 266 SUPERFAMILY LysM domain 124 168 IPR036779 -
Lele16g0148 266 PANTHER LYSM AND PUTATIVE PEPTIDOGLYCAN-BINDING DOMAIN-CONTAINING PROTEIN 27 263 IPR045030 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele16g0148 Lele-ChrLele16 877207 878449 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele16g0148 16 877207 878449 Lele13g2283 13 28886369 28887045 CCT
Lele16g0148 16 877207 878449 Lele14g2217 14 27236368 27237092 CCT
Lele16g0148 16 877207 878449 Lele15g0131 15 781031 786089 CCT
Lele16g0148 16 877207 878449 Lele16g0139 16 805316 812038 CCT