Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g0114 ATGGATGGTGTGGTTCATTTGAGGAAGCAGTTGGTTGATTACAGTGCCTCTCTGTTTCAGGAGGGTTTTCTGGATGATCAATTTACTCAGCTTCAGCAACTTCAAGATGAAAGCAACCCAGACTTTGTGGTTGAAGTGGTGACTCTGTTTTTTGAAGACGCAGAGAGGCTTCTTAACGAGCTGGCAAAAGCACTATGCCAGGAAAGCATTGGCTTCAAAAGAGTGGATGCCCATGTTCACCAGTTGAAGGGTAGTAGCTCCAGCATTGGAGCACAGAGAGTTCAGAAAGTCTGCATTGCCTTCCGCAGCTATTGTGAGGAGCAGAATGTTGAAGGGTGTCTTAAAAGCTTGCAACAAGTAAAAGAAGAGTATTGGCTGGTGAAGAACAAACTTGAGACTCTGTTCAAGATGGAGCAACAGCTTTTGGCCGCTGGGGGTTCGGTTCCCATGTAG 453 0.4614 MDGVVHLRKQLVDYSASLFQEGFLDDQFTQLQQLQDESNPDFVVEVVTLFFEDAERLLNELAKALCQESIGFKRVDAHVHQLKGSSSSIGAQRVQKVCIAFRSYCEEQNVEGCLKSLQQVKEEYWLVKNKLETLFKMEQQLLAAGGSVPM 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele16g0114 150 Pfam Hpt domain 45 123 IPR008207 GO:0000160
Lele16g0114 150 PANTHER PHOSPHORELAY INTERMEDIATE PROTEIN YPD1 7 141 IPR045871 GO:0000160|GO:0009927|GO:0043424
Lele16g0114 150 FunFam Histidine-containing phosphotransfer protein 1 2 149 - -
Lele16g0114 150 SUPERFAMILY Histidine-containing phosphotransfer domain, HPT domain 5 140 IPR036641 GO:0000160
Lele16g0114 150 CDD HPT 45 124 IPR008207 GO:0000160
Lele16g0114 150 ProSiteProfiles Histidine-containing phosphotransfer (HPt) domain profile. 39 144 IPR008207 GO:0000160
Lele16g0114 150 Gene3D HPT domain 1 150 IPR036641 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele16g0114 Lele-ChrLele16 698369 699478 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele16g0114 16 698369 699478 Lele13g2318 13 29094133 29098011 CCT
Lele16g0114 16 698369 699478 Lele14g2253 14 27443859 27448047 CCT
Lele16g0114 16 698369 699478 Lele15g0093 15 570962 574823 CCT
Lele16g0114 16 698369 699478 Lele16g0114 16 698369 699478 ECH
Lele13g2309 13 29022590 29027132 Lele16g0114 16 698369 699478 hybridization
Lele14g2240 14 27350822 27358848 Lele16g0114 16 698369 699478 hybridization