Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g0096 ATGCAGCGAAAGAAAGTGAGAACCGAAATGAAGAACATTTTCAAGAAGCTTCACATTGGGAGCAATCACGATCCTACTAGATCCCATGAAACTCCTCCCTCCTCTTCCTCCTCCTCTGCCGTTACCTCACAAACTGGCGCCTCCGATCTTCATGAAACTCCTGTTCTGAACTCCGGTAGTTCTATGCCTAGCCCTTCTTCTTCACCATCGACTTCGCCTGCTCCTCCACCAGATGGCGGCACTTCCACCCCTCCACCTGCCAAGTCCAGTTTTCAAGACTATTTCTCTTCGGAGGAGGAGTTCCAGGTTCAGTTAGCCCTGGCCATCAGCGCTTCCAATTCGGAGTTCCGGGATGATCCTGAGAAGGATCAGATCCGAGCGGCAACGCTACTGAGCTTAGGAGGTCATCGAACTCATTGCGCAACGAATGAGGATCACGAAGCAGAGGCACTCTCTAGGCAGTACTGGGAATACAATGTTCTTGACTATGAGGAGAGAGTAGCAGATGGTTTTTATGATGTATACAGCCTCTGTAATGATGCGGCCATGCAGAAGAAAATGCCATCTCTGGCAGATCTTGAAGGAAACCCTGCAAGTTCTAATTTTGAAATTGTCATGGTTAATAGAAAGATTGATCCTGTCTTGGAAGAGCTGTTGCAAATTTCCCATTGCATTGCATTAGACTGCCCAGTCACCAAGGTTGGTGTTTTGGTACAAAGGCTTGCTGAACTTGTTACAGGGCATATGGGTGGTCCTGTAAAGGATGCTAATATTGCATTGGCGAAATGGATGGAAAGAAGTACGGAGCTAAGAACATGCCTTCACACAAGTGTGGTGCCCCTTGGGTCCATAAATATTGGGCTATCCAGGCATCGGGCTTTGCTTTTCAAGGTATTAGCTGACAATATCAAGATGCCTTGTAGACTGGTAAAAGGCAGTCATTACACTGGTGTTGAAGATGATGCTGTAAACATAATTAAGTTGGATGATGAAAGGGAGTTTTTGGTTGATCTCATGGCTGCTCCTGGAACACTTATCCCAGCTGACTTAAGTGCAAAGGAAGTAGCCTTTAAGCCATACAACCCCAAGATTTTGCCAAGTTTACAATCCAGTAAAGAAAGTGGATTTTCTTACTCAAGGAAAATATCATCTGATGGTGAAGGAAGTAGTCAAATTTCTGTGAAAAGGAGTGGTTCATCACCATTGACTGGAAAATTGTCTCTTGAGAAGTTAGACATGTCTTCAAAAATGATCTCAAGCAGAGACACTGGTGCTGTTGCTTCCAAAATACCCAATAGAGCAACTTCCAGCCAACCAGAAAAATTGCCCCCATCAGCTGGCACTTTTTTGTACAAGGGTACTCTTGGAATGAATGTAGTTGGTGATGGGACAAGACTGAATGCCAATATTGTACCCTATAGTCAGGATAGCCCAGACAACTCGAGGAGCCTTTTTGCGGATCTTAACCCATTCCAGATAAAAGGAACTGGCAAGACCACTGTAGACAACAAACCTATGGAAAATAAGTCTCCTGAGCTTCAAATTACGAGAGATAATTCTGTCTCTGGCCAACCCCCAGTACCATTGATGTGGAAGAATTGTTATGCTTACAATGACATTCCCAGAAAAGTCAACCGTAATCCTAGTGAATATAGTTCCCAATCATCACATAATTCTAATATAAATACTCCCAATTTGATGGAAGTCACCGGTTCAGCATTGGCACCTGGTGCAGGTGAGCTGAACAGGGTTGGGGATCTCAAAGAGGACTGTAACAAAAGGAATGGGGCAGTTTTTGAAAATGACATGTTAGGTGAGGCTAAAGAACATGAGGACAATGAAATTAAGTTTCATGACCGGAGAAAGTGCACACATGACAGATTCATGGAGAGCAATTTGAAATTAAAGGCCTCAGAGCGTCCTAGCTCATCAATTGATTCCATTGCTATTGGGGGTGATCAAATATTGGATGATGCGGATGTTGGAGAATGTGAAATTCCATGGGAGGATTTGATTATTGGGGAAAGAATTGGTCTAGGTTCATATGGTGAGGTATTCCGTGCTGACTGGAATGGCACTGAGGTTGCTGTGAAGAAGTTTCTGGATCAGGACTTTTCAGGTGCTGCATTGGCTGAATTCAAAAGAGAAGTACGGATTATGCGTCGATTGCGTCATCCAAATATTGTTCTTTTTATGGGTGCCGTTACTCGTCCTCCCAATCTCTCAATCATTTCAGAATTTCTTCCAAGAGAAAGCTTGTACAAAATTCTTCATCGTCCGAATTGTCAGATTGACGAGAAGCGTAGAATAAAAATGGCTTTGGATGTGGCAAGAGGCATGAACTGCTTACACACCAGCACACCTACAATTGTTCACCGAGATCTGAAGTCACCAAATCTTTTGGTTGATAATAACTGGAATGTCAAGGTTTGTGATTTTGGGTTATCACGCTTGAAGCACAACACATTTTTGTCATCCAAGTCAACTGCTGGAACGCCTGAATGGATGGCTCCTGAAGTTCTCCGCAATGAGCCTTCGAATGAGAAGTGTGACGTTTTTAGTTTTGGAGTCATCCTGTGGGAGCTTTCCACTTTAAGGTTGCCATGGAGTGGAATGAACCCTATGCAGGTTGTTGGTGCAGTTGGATTCCAAAATCGTCGCCTAGAAATCCCCAAGGAAATCGATCCTGTTGTTGCGAGAATAATTTGGGAATGTTGGCAACAGGATCCAAATTTGCGCCCCTCATTTGCGCAGCTCTCGGTGGTTTTGAAGTCCCTACAGCGTCTAGTTATCCCGTCTTATCAAGATCAGATGGCCTCGCCCCGGCCACAGGAGATTTCTGTAAATTCCACCCCTTAG 2859 0.4428 MQRKKVRTEMKNIFKKLHIGSNHDPTRSHETPPSSSSSSAVTSQTGASDLHETPVLNSGSSMPSPSSSPSTSPAPPPDGGTSTPPPAKSSFQDYFSSEEEFQVQLALAISASNSEFRDDPEKDQIRAATLLSLGGHRTHCATNEDHEAEALSRQYWEYNVLDYEERVADGFYDVYSLCNDAAMQKKMPSLADLEGNPASSNFEIVMVNRKIDPVLEELLQISHCIALDCPVTKVGVLVQRLAELVTGHMGGPVKDANIALAKWMERSTELRTCLHTSVVPLGSINIGLSRHRALLFKVLADNIKMPCRLVKGSHYTGVEDDAVNIIKLDDEREFLVDLMAAPGTLIPADLSAKEVAFKPYNPKILPSLQSSKESGFSYSRKISSDGEGSSQISVKRSGSSPLTGKLSLEKLDMSSKMISSRDTGAVASKIPNRATSSQPEKLPPSAGTFLYKGTLGMNVVGDGTRLNANIVPYSQDSPDNSRSLFADLNPFQIKGTGKTTVDNKPMENKSPELQITRDNSVSGQPPVPLMWKNCYAYNDIPRKVNRNPSEYSSQSSHNSNINTPNLMEVTGSALAPGAGELNRVGDLKEDCNKRNGAVFENDMLGEAKEHEDNEIKFHDRRKCTHDRFMESNLKLKASERPSSSIDSIAIGGDQILDDADVGECEIPWEDLIIGERIGLGSYGEVFRADWNGTEVAVKKFLDQDFSGAALAEFKREVRIMRRLRHPNIVLFMGAVTRPPNLSIISEFLPRESLYKILHRPNCQIDEKRRIKMALDVARGMNCLHTSTPTIVHRDLKSPNLLVDNNWNVKVCDFGLSRLKHNTFLSSKSTAGTPEWMAPEVLRNEPSNEKCDVFSFGVILWELSTLRLPWSGMNPMQVVGAVGFQNRRLEIPKEIDPVVARIIWECWQQDPNLRPSFAQLSVVLKSLQRLVIPSYQDQMASPRPQEISVNSTP 952
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele16g0096 952 ProSiteProfiles Protein kinase domain profile. 671 930 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele16g0096 952 FunFam PAS domain-containing protein tyrosine kinase family protein 749 940 - -
Lele16g0096 952 CDD STKc_MAP3K-like 677 923 - -
Lele16g0096 952 MobiDBLite consensus disorder prediction 1 25 - -
Lele16g0096 952 ProSitePatterns Protein kinases ATP-binding region signature. 677 699 IPR017441 GO:0005524
Lele16g0096 952 SUPERFAMILY Protein kinase-like (PK-like) 662 943 IPR011009 -
Lele16g0096 952 MobiDBLite consensus disorder prediction 1 91 - -
Lele16g0096 952 MobiDBLite consensus disorder prediction 493 521 - -
Lele16g0096 952 MobiDBLite consensus disorder prediction 68 83 - -
Lele16g0096 952 FunFam Serine/threonine-protein kinase isoform 1 662 749 - -
Lele16g0096 952 Pfam Protein tyrosine and serine/threonine kinase 672 920 IPR001245 GO:0004672|GO:0006468
Lele16g0096 952 SMART serkin_6 671 929 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele16g0096 952 Gene3D Phosphorylase Kinase; domain 1 664 748 - -
Lele16g0096 952 Pfam Ethylene-responsive protein kinase Le-CTR1 148 346 - -
Lele16g0096 952 MobiDBLite consensus disorder prediction 26 67 - -
Lele16g0096 952 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 84 926 - -
Lele16g0096 952 Gene3D Transferase(Phosphotransferase) domain 1 751 932 - -
Lele16g0096 952 MobiDBLite consensus disorder prediction 379 400 - -
Lele16g0096 952 ProSitePatterns Serine/Threonine protein kinases active-site signature. 790 802 IPR008271 GO:0004672|GO:0006468
Lele16g0096 952 PRINTS Tyrosine kinase catalytic domain signature 831 841 IPR001245 GO:0004672|GO:0006468
Lele16g0096 952 PRINTS Tyrosine kinase catalytic domain signature 850 872 IPR001245 GO:0004672|GO:0006468
Lele16g0096 952 PRINTS Tyrosine kinase catalytic domain signature 894 916 IPR001245 GO:0004672|GO:0006468
Lele16g0096 952 PRINTS Tyrosine kinase catalytic domain signature 784 802 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele16g0096 Lele-ChrLele16 576455 583312 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele16g0096 10 907 MAP Kinase Kinase Kinase AT1G08720 54.440 0.0 915
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Lele16g0096 PK_Tyr_Ser-Thr 2.8e-61 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele16g0096 16 576455 583312 Lele16g0096 16 576455 583312 ECH
Lele14g2257 14 27477474 27484505 Lele16g0096 16 576455 583312 hybridization