Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g0093 ATGTTGTTACTGCTCGCAGATCACAACAATTCTGAGACTTCAGTCAAAGCGAAGAACAAATCCAACAGGTTGTTTCAGTTGACAGTAAACATTATTATGGCTGTACTTGTATCGACTTCCTCTCATCTCAATTTTACTGTGAGGAGGCGCCAACCAGAGCTCGTACCTCCAGCAAAGCCAACTCCTCATAAGCTTAAGCTTTTGTCTGACTTGGACGACCAAGACAGTTTACGTGCACATGTTCCACTGGTACATTTCTACCGCCACAAGGCTTCGATGGCGGGGAAGGACCCAGTCAAAGTCATCAGAGACGCATTAGCTCAAACACTGGTATTTTACTACCCATTGGCAGGTAGGCTCAGTGAAGGTGTTGGCCGCAAGCTTTTAGTGGAATGTAACGGAAAAGGCGTTCTTTTCATTGAAGCTGAAGCAGATGTAACCCTAGCTCAGTTCGGTGACAACCTTAAACCTCCATTTCCATGTTTCAATGACCTCCTTTACAATGTTCCTGCTTCTGAAGGAATCCTTCATTGCCCCCTCTTACTTATCCAGGTAACACGTCTCAAGTGTGGAGGCTTTGTGTTCGCTGTTCGCATGAATCACACCATGACCGACGGACCGGGTATTTTGCAGTTCATGAACGCTTTAGCTGAAATAGCTAACGGGGCAAGTGAGCCCTCCATTCTTCCTGTTTGGCATAGAGAGATCCTAAGTGCAAGGAACCCGCCACGTGTCACTTGCACGCATCATGAGTTTGAGGAATTGGCTGCTGGTGCCACCATTCCCTTAACAGACATAGTCCATCAATCCTTCTTCTTTGGGCCAACTGAGATATCTGTCATTCGTCGTCTAATTCCTCGTCACCTCAGGCAATCTACAACGTTCGAGGTCCTCGCAGCTTGTCTCTGGCGTTGCCGTACTAAGGCCTTGCGACTAGATCCAAATGACGATGTTCGAACGTTGGTCATCGTAAATACCCGTTTTGGCCGAGGTAGGTTTAACCCTCCAATACCTAGTGGTTATTATGGCAATGCTTTTGTGTATCCAGCTGCAGTTGCCACTGCGGGGAAGCTTTGTGAGAGTCCATTAGAATACGCGTTGGAGTTAGTGAAAAAAACTAAGGCTGAAGTGAATGAAGAGTATGTGCACTCCATGGCTGATCTTTTGGTGACTAGAGGGCGACCTTGTTTTACTTCAGTGAGATCGTGGATGATATCAGATCTATCGCGTGTTGGCTTCAGAGATGTCGATTTTGGTTGGGGCAAGGCTGTGTATGCTGGTCTGGCGAAGGCTGGGCTTGGCTCACTTCCTGGAGTGAGTTTCTCCGTTTCATCTACCAATAATAAAGGAGAAGAGGGAAGAGTTGTGCTTATGTGCTTGCCACCCAAAGCTATGAAGAGGTTCGCCAAAGAGGTGGATAACATACTTGGCACTTACAAGAATAAAGATTCCAGCATTATCATGTCTCCCTTGTAA 1476 0.4668 MLLLLADHNNSETSVKAKNKSNRLFQLTVNIIMAVLVSTSSHLNFTVRRRQPELVPPAKPTPHKLKLLSDLDDQDSLRAHVPLVHFYRHKASMAGKDPVKVIRDALAQTLVFYYPLAGRLSEGVGRKLLVECNGKGVLFIEAEADVTLAQFGDNLKPPFPCFNDLLYNVPASEGILHCPLLLIQVTRLKCGGFVFAVRMNHTMTDGPGILQFMNALAEIANGASEPSILPVWHREILSARNPPRVTCTHHEFEELAAGATIPLTDIVHQSFFFGPTEISVIRRLIPRHLRQSTTFEVLAACLWRCRTKALRLDPNDDVRTLVIVNTRFGRGRFNPPIPSGYYGNAFVYPAAVATAGKLCESPLEYALELVKKTKAEVNEEYVHSMADLLVTRGRPCFTSVRSWMISDLSRVGFRDVDFGWGKAVYAGLAKAGLGSLPGVSFSVSSTNNKGEEGRVVLMCLPPKAMKRFAKEVDNILGTYKNKDSSIIMSPL 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele16g0093 491 Pfam Transferase family 47 472 - -
Lele16g0093 491 Gene3D - 41 253 IPR023213 -
Lele16g0093 491 PANTHER ACYL TRANSFERASE 4 45 475 - -
Lele16g0093 491 Gene3D - 254 472 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele16g0093 Lele-ChrLele16 545473 547666 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele16g0093 50 470 Monolignol Biosynthesis Gene Families AT5G48930 31.929 6.79e-50 174
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele13g2329 13 29173283 29174770 Lele16g0093 16 545473 547666 hybridization
Lele14g2260 14 27519147 27526441 Lele16g0093 16 545473 547666 hybridization