Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g0091 ATGCTTTCGCCGTTGGTTTCTTGGATCTTGGCGTCCTCTCCTTCTTCCTCATCCTCTTCCGAGGAAGAAGATAACTTTGTGGACGACGGAGATCATTACGAGAACGTCGGCGAGAACGAGCATTTCCTCCGCGAAGCCGAGGAGCTTCCTTCAACATCATGCGCTGGGGATACTAAAACCACTCCCGTCGCCCTAGCCACTCCCGGCGCCGACGACTCTTGCATTCCCGACACGGACACCGGCTCGAGAAAACGACGGCGTATCAGCCATTCTTATCCCCGGAGACAACATCAGAGGCTGTGGACGAAGCAAGACGAGATCGAACTCTTGAGGGGATATCTGTGTTATATCAAGCAGAACAGATGGGGCACCACATCTCTCCAAAACGACGTAACATTCTTCCACGATCACATCAAGCCTAAATTGAATCAGGACTTCAACAAGAATCAACTCGTCCAGAAGCTTCGAGGATTAAAGAGAAAACACAAGACCGTTTTAGACAAAATGAACTCCGGCAGGGAAGTTTCGCACAAGAGCCCCCAGGAGGAGGCGATTTTTGAGATTTCCCAGAGGATCTGGGACAAGAATCGAGACAAGGAATCAGGCCCGGATCCTGATAATACCGATAATATCGAGGTGAATGGTGAAGACGATGATGGCGATGAATCGGGGCATTTGAATGAGGAGAACAAAGATATAAAGAAGCTGATAGAGGAGACGATGAGGTCCTGTTTGTCACCATTGAACAATATTAATGCAGAGGAAGTATCAGGACTGAAGCTGGTGGAACAATACGGAATTGGGGAAGAAGGCGATGGGAAGAAGCAAAGGATTTTGGAACTGGAAGCTTATTTGAAGCAGTTGGAATTGTTGCAGGATCAAATTAAGGCTAGAATAGAGGAGTTGCGAAAAGAAGGTGAATGA 924 0.4794 MLSPLVSWILASSPSSSSSSEEEDNFVDDGDHYENVGENEHFLREAEELPSTSCAGDTKTTPVALATPGADDSCIPDTDTGSRKRRRISHSYPRRQHQRLWTKQDEIELLRGYLCYIKQNRWGTTSLQNDVTFFHDHIKPKLNQDFNKNQLVQKLRGLKRKHKTVLDKMNSGREVSHKSPQEEAIFEISQRIWDKNRDKESGPDPDNTDNIEVNGEDDDGDESGHLNEENKDIKKLIEETMRSCLSPLNNINAEEVSGLKLVEQYGIGEEGDGKKQRILELEAYLKQLELLQDQIKARIEELRKEGE 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele16g0091 307 Pfam Protein of unknown function, DUF573 98 194 IPR007592 GO:0006355
Lele16g0091 307 MobiDBLite consensus disorder prediction 11 90 - -
Lele16g0091 307 MobiDBLite consensus disorder prediction 194 228 - -
Lele16g0091 307 PANTHER BNAANNG10740D PROTEIN-RELATED 14 300 IPR007592 GO:0006355
Lele16g0091 307 Coils Coil 274 307 - -
Lele16g0091 307 MobiDBLite consensus disorder prediction 30 47 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele16g0091 Lele-ChrLele16 534007 534930 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele16g0091 51 195 GeBP Transcription Factor Family AT3G04930 45.033 4.33e-33 124
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GeBP Lele16g0091 DUF573 1.1e-23 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele13g2331 13 29182911 29183831 Lele16g0091 16 534007 534930 hybridization
Lele14g2262 14 27528923 27531908 Lele16g0091 16 534007 534930 hybridization