Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g0089 ATGGCGGACAAGGCGGTTACTGTAAGAACCCGAAAGTTCATGACCAACCGTCTGTTATCAAGAAAACAATTTGTCATTGATGTACTTCATCCTGGGAGGCCTAACGTATCCAAGGCGGAGCTTAAGGAGAAGCTAGCAAGGATGTACGATGTCAAAGATCCTAATGCTATTTTTGTCTTCAAGTTTAGAACTCACTTTGGAGGCGGGAAATCGACTGGATTTGGTTTAATTTATGATTCTGTTGAAAATGCAAAGAAGTATGAGCCCAAGTACAGGCTTATCAGGAATGGACTCTCTACCAAGGTCGAGAAGTCAAGGAAGCAGATGAAAGAGCGCAAGAATCGTGCTAAGAAAATCCGTGGAGTAAAGAAGACTAAGGCATCTGAATCTGCCAAGAAGAAATGA 405 0.4247 MADKAVTVRTRKFMTNRLLSRKQFVIDVLHPGRPNVSKAELKEKLARMYDVKDPNAIFVFKFRTHFGGGKSTGFGLIYDSVENAKKYEPKYRLIRNGLSTKVEKSRKQMKERKNRAKKIRGVKKTKASESAKKK 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele16g0089 134 SUPERFAMILY Ribosomal proteins S24e, L23 and L15e 6 108 IPR012678 GO:0003735|GO:0005840|GO:0006412
Lele16g0089 134 Gene3D - 1 133 - -
Lele16g0089 134 FunFam 40S ribosomal protein S24 1 134 - -
Lele16g0089 134 Hamap 30S ribosomal protein S24e [rps24e]. 4 106 IPR001976 GO:0003735|GO:0005840|GO:0006412
Lele16g0089 134 MobiDBLite consensus disorder prediction 110 134 - -
Lele16g0089 134 ProSitePatterns Ribosomal protein S24e signature. 66 88 IPR018098 -
Lele16g0089 134 Pfam Ribosomal protein S24e 25 103 IPR001976 GO:0003735|GO:0005840|GO:0006412
Lele16g0089 134 MobiDBLite consensus disorder prediction 98 134 - -
Lele16g0089 134 PANTHER 40S RIBOSOMAL PROTEIN S24 1 130 IPR001976 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele16g0089 Lele-ChrLele16 528760 530246 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele16g0089 1 133 Cytoplasmic Ribosomal Protein Gene Family AT5G28060 86.466 3.21e-84 241