Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g0088 ATGGCCACAATCTCCTTACCTGAAGTTAACCCCTTGAAATGGAAACGAACCTTCCCTCTACAGATATTCCCCCGTCGCATCCCTTACACCAATCGCTCGCTCGTTCAACCACCTAAATTTTGCTCAATTCTGTTCCTGAAAGCGTCGCCTACGCAAAATTGTATCAAATGCTTATTCTCGCAAAAGCCATCTCTACAGATGGGTCCTGAGCCCCTTGACGGAGAATCCTCTAAAACTCCCTTCGAGGTTATCGCAAATACAATATTGAATGCGCTAAAGGCCTTGAGGAAACCGACGATAGCTGCGGTTTTGCTAGGGCTTTTATTGATGTATGATCCCAACTCGGCAATAGCCGCATCTGGAGGTCGAATGGGGGGAAGGTCCTTCTCTTCGCATTCTTCGTCTTCGAGGAGCTATTCGGTACCTAGGTCATCCAGCTCGGGCTTTTCATACGCGATACCGTATTATGGGCCTTCTCCTTTTGGGTTTGGTGGGGGCGGTGGCGGGTTCTACGTTGGGCCGGCGGTAGGTGTGGGAGTAGGTGCTGGATCCAGTTTCTTCCTCATCTTGATGGGTTTCGCGGCTTTTATTTTGGTATCTGGGTTTCTTTCAGATCGTTCTGAGGGTAGTTTGCTTACTGCCACCGAGAAAACTAGTGTGCTCAAGCTTCAGGTTGGGTTGTTGGGGATGGGGCGCTCGCTTCAAAGGGATTTGAATAGGATTGCAGAAGTTGCAGATACGTCATCTCCTGAAGAGACAACACTAGCTTTACTTCGACATCCTGATTACTGCATCTCAGCGTATTCATCCAGGACATTCCATAATGCTACTGCTGTCGCTGATTCCCAAAATCATTATTCCATAAAGAAGAATCTGCCAGAGTGCAAGTCTTTGCATATAGCGGCAAGCCTGGAAAATGAAGGGAAAACAGCACAGCAATCCAGAACCCACAATCCTAGCTATTCCAGAGGCTATATAAGTTATCAAAGGCCTGGGAGTAGGTTTCTTGCCTCTTATTGCGTTGACTTAAAGCGAAGTGTTGAGGATGGAGAGAAACGCTTCAATCAACTTTCAATTGAAGAGCGTGGAAAATTTGATGAGGAGACTCTTGTCAATGTGAACAACATAAAAAGGCAAAGCACAAGCCAAAGAGCAAATGGATTTAGCAATGAGTACATTGTGATTACAATCTTGGCAGCAGCCGAAGGAGTACATAAACTTCCCACCATCAATGGAAGTGGAGACTTGAAGGAAGCCTTACAAAAGCTGGGATCCATTTCTTCGAGCAAATTACTAGCAGTTGAGGTGTTATGGACTCCACAGAATGAAAACGACACTCTCTCGGAACGAGAACTCCTTGAAGATTACCCACTCTTGCGGCCTTTGTGA 1389 0.4636 MATISLPEVNPLKWKRTFPLQIFPRRIPYTNRSLVQPPKFCSILFLKASPTQNCIKCLFSQKPSLQMGPEPLDGESSKTPFEVIANTILNALKALRKPTIAAVLLGLLLMYDPNSAIAASGGRMGGRSFSSHSSSSRSYSVPRSSSSGFSYAIPYYGPSPFGFGGGGGGFYVGPAVGVGVGAGSSFFLILMGFAAFILVSGFLSDRSEGSLLTATEKTSVLKLQVGLLGMGRSLQRDLNRIAEVADTSSPEETTLALLRHPDYCISAYSSRTFHNATAVADSQNHYSIKKNLPECKSLHIAASLENEGKTAQQSRTHNPSYSRGYISYQRPGSRFLASYCVDLKRSVEDGEKRFNQLSIEERGKFDEETLVNVNNIKRQSTSQRANGFSNEYIVITILAAAEGVHKLPTINGSGDLKEALQKLGSISSSKLLAVEVLWTPQNENDTLSERELLEDYPLLRPL 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele16g0088 462 Pfam Protein of unknown function (DUF1517) 337 462 IPR010903 -
Lele16g0088 462 Pfam Protein of unknown function (DUF1517) 218 290 IPR010903 -
Lele16g0088 462 PANTHER MYELIN-ASSOCIATED OLIGODENDROCYTE BASIC PROTEIN 72 462 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele16g0088 Lele-ChrLele16 521993 525559 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele16g0088 16 521993 525559 Lele13g2344 13 29251438 29260483 CCT
Lele16g0088 16 521993 525559 Lele14g2276 14 27593829 27598439 CCT
Lele16g0088 16 521993 525559 Lele15g0071 15 427009 432172 CCT
Lele16g0088 16 521993 525559 Lele16g0076 16 457972 465597 CCT
Lele16g0088 16 521993 525559 Lele16g0088 16 521993 525559 ECH
Lele13g2334 13 29189336 29192718 Lele16g0088 16 521993 525559 hybridization
Lele14g2264 14 27534499 27538026 Lele16g0088 16 521993 525559 hybridization