Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g0075 ATGGAGAAGGCGAGCAAATGGATAAGAAACCATCTTACGGGGAAAAAGGAAGAGAAACATAAGGTGGACAACAACATCGCTGAAAGCCCCAGAGCGAAGCGCAGATGGAACTTTCGAAGAAAGTCAAACGCCAGAATGACAGGAAACATAGATTCGCGTAAATTTTCCGCTTCTTTTGATTCAAGCCACTCTGCTAACCTCCAAATACAATCGCTTCTGCATACTGAGGCTCCATACAGTTTTTCAGCTTCTCTATTGCCAAAGGCTCCTACAAACATTCGAAGCGCCGCTGCCACCAAGATTCAGGCGGCTTTTCGCTCCTATTTGGCGAGGAAAGCATTGCATGCTTTGAAGGGACTAGTGAAGATACAGGCACTAGTGAGAGGCCATCTTGTAAGGAAACAAACAAGTGCTACCCTGCGAGGCATGCATGCCCTGATGGCTATTCAAGTAAGAGCCAGAATCCACAGACTTCAGGCCGCACAAGAAGCTAACCTGCAGATTACAAAACACTCATCCCGAAATCCACAAATTCCTCGGGATAAACATCTCCTGAGAGAATCTAAAGACTCAGAGGATATGGACCTAAAAGACATGTTGGAAATTATGGAAAGCAGAAGCGGCCTTCTAGATCCTTCATATACAGACCATGTTGTCATGCCATTCTATTCAGAACAAAAATATCAATACAAGGATGATGTTTTTACAGCAGAACAAAGCAGCTCGGGAAACAACTTATCAAGTAGCCAGCGCCATTCAGTGTCATGGGCACCCAATGACCTCATCAGGACAGAATCTTCGAGGGCTAAAGCTAAAGCTAGGTCTTGCAGTGAACCAAAGCAACGACCCGTACGAGGTACGAGGAGCAAAAGCAAGTCCATAGAATCTACAGAGGACTTGATTTTTTCATTGGATGGTCGAAGGCAGTCTATGTCATCAAACTCGTCACGCTTTATCTACCATGGAAACCTGGATCATTGGGCCATGAACCATTACGAGTCATCCCCGGACATCAAAAGTGAGTCCTTCAGCAGCAGCATGGGCTTGGAGACTAATGTTTCTTACTACTGA 1071 0.4538 MEKASKWIRNHLTGKKEEKHKVDNNIAESPRAKRRWNFRRKSNARMTGNIDSRKFSASFDSSHSANLQIQSLLHTEAPYSFSASLLPKAPTNIRSAAATKIQAAFRSYLARKALHALKGLVKIQALVRGHLVRKQTSATLRGMHALMAIQVRARIHRLQAAQEANLQITKHSSRNPQIPRDKHLLRESKDSEDMDLKDMLEIMESRSGLLDPSYTDHVVMPFYSEQKYQYKDDVFTAEQSSSGNNLSSSQRHSVSWAPNDLIRTESSRAKAKARSCSEPKQRPVRGTRSKSKSIESTEDLIFSLDGRRQSMSSNSSRFIYHGNLDHWAMNHYESSPDIKSESFSSSMGLETNVSYY 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele16g0075 356 SMART iq_5 116 137 IPR000048 GO:0005515
Lele16g0075 356 SMART iq_5 93 115 IPR000048 GO:0005515
Lele16g0075 356 Gene3D - 92 145 - -
Lele16g0075 356 PANTHER IQ-DOMAIN 5-RELATED 1 312 - -
Lele16g0075 356 MobiDBLite consensus disorder prediction 1 22 - -
Lele16g0075 356 MobiDBLite consensus disorder prediction 239 262 - -
Lele16g0075 356 MobiDBLite consensus disorder prediction 265 293 - -
Lele16g0075 356 ProSiteProfiles IQ motif profile. 94 122 IPR000048 GO:0005515
Lele16g0075 356 MobiDBLite consensus disorder prediction 239 293 - -
Lele16g0075 356 Pfam IQ calmodulin-binding motif 96 114 IPR000048 GO:0005515
Lele16g0075 356 Pfam IQ calmodulin-binding motif 121 135 IPR000048 GO:0005515
Lele16g0075 356 ProSiteProfiles IQ motif profile. 118 145 IPR000048 GO:0005515
Lele16g0075 356 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 93 136 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele16g0075 Lele-ChrLele16 456020 457316 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele16g0075 1 283 IQD Protein Family AT4G14750 35.922 7.97e-33 125