Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g0069 ATGAGCGTACCAGCCATAATGAGGACTATAAGTTGCGAAAGGCAGCGCTCAACTCCCGTTCCCAAAATGTGTTGTATTGCTGTGGGGTCTTTCCTCACCCAACTGACTAAGGTAGCTGCATTGGGTTCATTAGCAGAGCAGCATCATAGCTGGTGCACCGTAGAAATAGAACTCCAAAAGGCAAGGTGGGGGAATAATATGGATAGGGTGTTTTCAGGGGATGAAATCTCCGACCAGTTCTGGTCACCGCCGATATCCACCGGAACCCATGAACCCTCCAAGATGAACCGTAGCGCCTCCGAGTGGGCCTTCCAACGCTTCCTCCAGGAAGCTTCTGTGCCCTCCCCGACCTCCCCGGCTTCCTCCTCCTTCGCTCCTCACACTAACGATGACCGTCCGCTTCACATCAAGGATCAACCCAAACAGGACCCCGCTCTGAATACGGGGGTCACGCCGCTTCAGAACAATGGTCCCGTCCAGGCCCATGTGCCTTCACCCCCAACTTCTATTCCTAACTTTCCCGTTAATTCCGATGCCTACCAGGCTTACCTCAAGAACAAACTCAATCTCGCCTGTGCTGCTGTCGCATTGTCTCGGCAACAGGGATCTTTAATCAAAGCTCAAGATTCAGCTGCTTTTGTTGATAGTGGATCACTGGCTTCTAATTCTTCACAAGTTGGACTTCATGCTACTTTTAAAGGATCTGGTATATCTGGTCCATCTGGAAGTGATCCATCTAAATTACTGGATAAAGATACCAAAGCACCAGTTGGAATTCCTTCTTTACCTGTGATTCAAAAGAAGCCTGCTGTTGCAAACAAGCCAACGACAAGCGGATCATCAAGGGACCTATCAGATGATGATGACGTTGAGGGAGATGAGATGACCGAAAATATGGACCCTGCTGATGCAAAACGAGTAAGAAGGATGCTTTCCAATAGGGAATCCGCTAGACGTTCAAGAAGGAGAAAGCAGGCTCATTTAACTGAGGTTGAGACACAGGTTTCTCAATTAAGAGTTGAAAATTCATCCTTGTCAAAGCGTCTTACTGATGTAAGCCAGAAGTGCAGTGAATCTGGGGTTGACAACAGAGTGTTAAAAGCTGACATTGAAACATTAAGAGCAAAGGTGAAGATGGCTGAAGAAACTGTCAAAAGAATTACTGGATTGAACCCAATGTTTCATGCCATGTCTGAGATATCATCAATGGGAATCTCTTCGTTCGATGGAAGCCCTCCAGACACGTCAGCAGATGCAGCTGTGCCCGTGCAAGATGATCAAATCCATCACTTTTATCAACATACAAATACTCCTTTGTCCAGTCATGATCTGAGAGTGAACAATGGATTGGGGGATGTTTGTTCCAATGAAAATGTTCAGCAGAGCAGCGGGGCAGCTGTGGTAGCTGGGAACAAGATGGGACAAACAGCTTCCCTTCAGAGGGTGGCTAGCTTGGAACATCTGCAGAAGAGAATTTGTGGTGGTGCAGATTCATCTGGACCTTCTTCCAGTGGAGATCACTAG 1524 0.4744 MSVPAIMRTISCERQRSTPVPKMCCIAVGSFLTQLTKVAALGSLAEQHHSWCTVEIELQKARWGNNMDRVFSGDEISDQFWSPPISTGTHEPSKMNRSASEWAFQRFLQEASVPSPTSPASSSFAPHTNDDRPLHIKDQPKQDPALNTGVTPLQNNGPVQAHVPSPPTSIPNFPVNSDAYQAYLKNKLNLACAAVALSRQQGSLIKAQDSAAFVDSGSLASNSSQVGLHATFKGSGISGPSGSDPSKLLDKDTKAPVGIPSLPVIQKKPAVANKPTTSGSSRDLSDDDDVEGDEMTENMDPADAKRVRRMLSNRESARRSRRRKQAHLTEVETQVSQLRVENSSLSKRLTDVSQKCSESGVDNRVLKADIETLRAKVKMAEETVKRITGLNPMFHAMSEISSMGISSFDGSPPDTSADAAVPVQDDQIHHFYQHTNTPLSSHDLRVNNGLGDVCSNENVQQSSGAAVVAGNKMGQTASLQRVASLEHLQKRICGGADSSGPSSSGDH 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele16g0069 507 Coils Coil 328 348 - -
Lele16g0069 507 Coils Coil 363 390 - -
Lele16g0069 507 SUPERFAMILY Leucine zipper domain 305 354 IPR046347 GO:0003700|GO:0006355
Lele16g0069 507 MobiDBLite consensus disorder prediction 144 163 - -
Lele16g0069 507 Pfam Basic leucine-zipper C terminal 372 496 IPR020983 -
Lele16g0069 507 MobiDBLite consensus disorder prediction 113 170 - -
Lele16g0069 507 FunFam BZIP transcription factor 303 354 - -
Lele16g0069 507 MobiDBLite consensus disorder prediction 113 128 - -
Lele16g0069 507 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 308 323 IPR004827 GO:0003700|GO:0006355
Lele16g0069 507 MobiDBLite consensus disorder prediction 234 299 - -
Lele16g0069 507 SMART brlzneu 301 365 IPR004827 GO:0003700|GO:0006355
Lele16g0069 507 PANTHER BASIC LEUCINE ZIPPER 63 67 496 - -
Lele16g0069 507 Pfam bZIP transcription factor 304 357 IPR004827 GO:0003700|GO:0006355
Lele16g0069 507 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 303 355 IPR004827 GO:0003700|GO:0006355
Lele16g0069 507 Gene3D - 304 359 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele16g0069 Lele-ChrLele16 426916 432522 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele16g0069 67 394 bZIP Transcription Factor Family AT4G02640 39.589 8.86e-38 141
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lele16g0069 bZIP_C 3.5e-45 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele16g0069 16 426916 432522 Lele16g0069 16 426916 432522 ECH
Lele13g2350 13 29290959 29294354 Lele16g0069 16 426916 432522 hybridization
Lele14g2283 14 27627847 27631179 Lele16g0069 16 426916 432522 hybridization