Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g0065 ATGACCAACAACATACGTCTCCATGTCCTGCTCCCTGTCTTATGTCTCTCCCTCGTCTTCAATGCCGTTCTAGTAAGGAGCCAAAACCAGTCGTCGTTGTTCCTGGGATGTGGGTTGGCCGACGGTGGAGGCAAAGACGCGGACGGAAGGCAATGGGGCCCCGACAACAAGTACCTTTCGGGAGGTGATTCCAGCACGTTCAGAGCCTCCTACCAAGATCCTTCGCTTTTGTCCGAGGTTCCATACATGACGGCTCGAGTTTTCACGTCCGAGGCCACCTACAAATTTCCCATCAGTCCCGACAAACGTTATTGGGTCAGGCTACACTTTTATCCCTCTGTCTATTCAAACTTCGATCCTGCCAATTCATATTTCTCGGCCACTGCAAATGGGATCACCCTCTTGAGCAATTTTAGCGCCTCAATTACTTGCGAAGCCCTCTCACTAGCTTACATCGACAGAGAATATTCCCTCGCCCCTCTCAACTCAGATTCTCTCACCCTCACCTTCCAGCCTTCTGACAAGTACAAAGGGTCCTTCGCTTTTGTGAATGGCATTCAACTTATGGAAATGCCAGACTTGCTTGATTCGGCCACGCTGGTGGGTTTTGACCAAATGATGGATGCCAAAAGCTTGCATTCGCAGACAATGTTCAGACTCAATGTTGGAGGACAGTACATATCGCCATCCCAGGACTCTAATCTCACCAGAACTTGGTACGACGACACGCCGTATCTTTACGGCGCATCCACGGGTGTGACAACCCAAGCAGACAAGAGCGTCCAAATCAATTACCAAAGCATGCCACAGTACATTGCTCCTCCTACAGTCTACTCCACGTCGAGATCTATGGGAAGCGACAAGGATATGAATTTGGGGTATAACCTCACGTGGGTTTTCCAAGTGGATCCTAATTCCATGTATCTCACGAGGTTGCACTTCTGCGATTACACATATGACAGAATCAACGAAATAACCTTCAACATATATGTGAATAATCAGACGGCACAGTCCGGGGCTGATGTGATCGGATGGACAAGTGGGAAAGGTGTTCCGACGTACAAGGACTACGTAGTATATGCACAGGATGGGCCCGGCGCCGACCAACTCTGGCTTGCTCTCCACCCTGCAACTGAAACGAAGCCTGAATACTATGATGCGATTCTAAACGGGGTTGAGATATTCAAGCTCAACGATACAACCTTGGCGGGACCCAATCCTCAGCCTTCGGACATGCTAATGAAGGCCCAGGAGGAGCAACAAAAATCTTTCGGAAACAAGGATCAACAGAATGCTCATCCAGCTATAATTGGTGAAGCTGCGGGAGGGGCTGCTTTACTAGCTGCACTATGCGTCGTGGTTTACCAGAGGCAAAAGAGAGTCCCAGGATCAGAGTCGCACACATCGAGCTGGCTTCCGATCTATGGGAACACCCAAACTGCCAGCAAATCCACGATTTCTGGCAGGAGCTCTGCGGGTGTTACCTTGTCGGCCACGGCTCAAGGTCTTTGCAGGTATTTCTCGTTGACGGAGATAAAGCGTGCGACCAGCAATTTCGATGAGTCCAATGTTATTGGGGTTGGAGGATTCGGTAAGGTGTATAAAGGTGTGATTGATAATGGGTTTAAAGTGGCGATCAAGAGGTCCAATCCGCAATCGGAACAAGGTGTCAATGAGTTCCAGACTGAGATCGAGATGCTTTCAAAGCTTAGGCACAAGCATTTGGTCTCATTGATTGGGTTTTGTGAGGAAGATAATGAAATGTGTCTGGTTTATGACTACATGGCTCATGGCACTTTAAGGGAGCATATTTATAAGGGAAACAAGCCTGTCAATGGTCTCTCATGGAAGCAAAGGTTGGAGATTTGCATTGGAGCTGCAAGAGGACTTCACTACCTTCACACCGGGGCTACGTACACCATTATTCACAGGGATGTGAAAACAACAAACATTCTTCTAGATGAAAACTGGGTCGCCAAGGTTTCAGACTTTGGCCTCTCCAAAACTGGTCCAAACATGAATGCCGGCCACGTCAGCACAGTGGTAAAGGGTAGCTTTGGATACTTAGACCCTGAATATTTCAGGAGACAACAATTGACTGAGAAATCTGATGTGTACTCGTTTGGGGTTGTCCTGTTTGAGGTACTCTGTGCAAGACCTGCTCTGAATCCTAGCCTTTCCAAGGAACAGGTGAGTCTGGCGGATTGGGCTCTGATCAACAAAAGAAAAGGGACTCTAGAGGATATAATAGACCCGAATCTCAAAGGAAAGATCCGCCCAGAAAGCTTAAAAAAGTTTGCAGATAGTGCTGAGAAGTGCTTGTCAGATCATGGAGTGCATCGTCCCTCAATGAATGATCTGTTATGGAATCTTGAACTTGCCCTGCAGCTGCAGGAAAATCCAGAGCGTGCGGATGAAGGTGAGTTCGAAGAGATAAGCTTGAAAGGCAACGATGCAGGAACACATTATAAGAATGCAAGCCTTGGGGGTGAGCAGGAGAGGAGCAAGGAGTCGGGTGACAATTCTAATACCATCTTCTCACAAATTGTCAATCCCAAGGGACGATGA 2568 0.4805 MTNNIRLHVLLPVLCLSLVFNAVLVRSQNQSSLFLGCGLADGGGKDADGRQWGPDNKYLSGGDSSTFRASYQDPSLLSEVPYMTARVFTSEATYKFPISPDKRYWVRLHFYPSVYSNFDPANSYFSATANGITLLSNFSASITCEALSLAYIDREYSLAPLNSDSLTLTFQPSDKYKGSFAFVNGIQLMEMPDLLDSATLVGFDQMMDAKSLHSQTMFRLNVGGQYISPSQDSNLTRTWYDDTPYLYGASTGVTTQADKSVQINYQSMPQYIAPPTVYSTSRSMGSDKDMNLGYNLTWVFQVDPNSMYLTRLHFCDYTYDRINEITFNIYVNNQTAQSGADVIGWTSGKGVPTYKDYVVYAQDGPGADQLWLALHPATETKPEYYDAILNGVEIFKLNDTTLAGPNPQPSDMLMKAQEEQQKSFGNKDQQNAHPAIIGEAAGGAALLAALCVVVYQRQKRVPGSESHTSSWLPIYGNTQTASKSTISGRSSAGVTLSATAQGLCRYFSLTEIKRATSNFDESNVIGVGGFGKVYKGVIDNGFKVAIKRSNPQSEQGVNEFQTEIEMLSKLRHKHLVSLIGFCEEDNEMCLVYDYMAHGTLREHIYKGNKPVNGLSWKQRLEICIGAARGLHYLHTGATYTIIHRDVKTTNILLDENWVAKVSDFGLSKTGPNMNAGHVSTVVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFEVLCARPALNPSLSKEQVSLADWALINKRKGTLEDIIDPNLKGKIRPESLKKFADSAEKCLSDHGVHRPSMNDLLWNLELALQLQENPERADEGEFEEISLKGNDAGTHYKNASLGGEQERSKESGDNSNTIFSQIVNPKGR 855
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele16g0065 855 FunFam Receptor-like protein kinase FERONIA 595 808 - -
Lele16g0065 855 SMART serkin_6 519 794 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele16g0065 855 FunFam FERONIA receptor-like kinase 32 192 - -
Lele16g0065 855 FunFam receptor-like protein kinase FERONIA 481 594 - -
Lele16g0065 855 FunFam FERONIA receptor-like kinase 212 398 - -
Lele16g0065 855 SUPERFAMILY Protein kinase-like (PK-like) 496 793 IPR011009 -
Lele16g0065 855 MobiDBLite consensus disorder prediction 800 855 - -
Lele16g0065 855 ProSiteProfiles Protein kinase domain profile. 519 793 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele16g0065 855 MobiDBLite consensus disorder prediction 839 855 - -
Lele16g0065 855 ProSitePatterns Protein kinases ATP-binding region signature. 525 547 IPR017441 GO:0005524
Lele16g0065 855 ProSitePatterns Serine/Threonine protein kinases active-site signature. 641 653 IPR008271 GO:0004672|GO:0006468
Lele16g0065 855 MobiDBLite consensus disorder prediction 800 817 - -
Lele16g0065 855 Pfam Malectin-like domain 36 396 IPR024788 -
Lele16g0065 855 Gene3D - 212 398 - -
Lele16g0065 855 Gene3D - 34 192 - -
Lele16g0065 855 Gene3D Phosphorylase Kinase; domain 1 479 594 - -
Lele16g0065 855 Gene3D Transferase(Phosphotransferase) domain 1 595 817 - -
Lele16g0065 855 CDD STKc_IRAK 525 792 - -
Lele16g0065 855 PANTHER OS07G0166700 PROTEIN 504 798 IPR045272 GO:0004714|GO:0006468
Lele16g0065 855 Pfam Protein tyrosine and serine/threonine kinase 523 733 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele16g0065 Lele-ChrLele16 402989 405556 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele16g0065 33 855 Receptor kinase-like Gene Family AT3G51550 53.165 0.0 848
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Lele16g0065 Malectin_like 7e-36 CL0202
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele16g0065 16 402989 405556 Lele13g2362 13 29337815 29340987 CCT
Lele16g0065 16 402989 405556 Lele14g2293 14 27671211 27673602 CCT
Lele16g0065 16 402989 405556 Lele15g0057 15 343452 345849 CCT
Lele16g0065 16 402989 405556 Lele16g0059 16 375731 378113 CCT
Lele13g2357 13 29315182 29317749 Lele16g0065 16 402989 405556 hybridization
Lele14g2289 14 27651189 27653756 Lele16g0065 16 402989 405556 hybridization