Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g0064 ATGACTGCAACAAGATCTACAGCTGTGGAATTGGAACCTACAAGCCTATCTGTTCCACTGTCATCTGATATGGCTGCTGAAAAGAATGGCTCTGACATGCTGAGTGTTGGTACTGAAGCTGTTATGGCTGGTTTGAACATGTCACCAAATGCTAACAACACACATTCACCAAACTCAACAAAGCATTTGCAGACAAACTCGCCTTTTTCATCAAGAAAATCCTTGCTCCATGATGATGATGATAATTGGTCTCTTGCTTCCTCTGCTGCATCTGCCCGCACGGCTAGATCAAGGGTAACTGTAGGTTCAGCCCCCACATTTAGATGTTCAAACCGTGCAGATAAACGGAAGGAGTTTTATCTGAAGTTAGAGGAGAAACATCGAGCTCTTGAAGAAGAAGAAAACCAATACAAAGCAAGGCAGAAGGAAGAGGAAGAAGCAGCCATCAAGCAGTTGAGGAAGAACTTGGTAATCAGAGCAAAGCCAGTACCGAGTTTCTACTATGAAGGACCTCCTCCCAAGGTTGAACTTAAGAAGCTGCCACTGACTCGGCCTAAGTCACCAAAACTAACAAGGAGAAAGAGCTCTGGTGACGCTATCAGCTCATCTTCGGAAGTTTGTTCCCGGCAACAACGTCACAGCCTTGTTAGTCGGAAAGAGGCGTCTAACGGCCCTGTCACTCCAAAAACAAAGGAGCATCTTCTCGGACGTAAGGGCAATGGCAGTTGCGAGAAGTCAAAAGTGGGCAATGAAACAAAATCAGCACCTCCTAAAATGACACAGCAAACAAATGCAGACATATCAGTCCACTGA 813 0.4539 MTATRSTAVELEPTSLSVPLSSDMAAEKNGSDMLSVGTEAVMAGLNMSPNANNTHSPNSTKHLQTNSPFSSRKSLLHDDDDNWSLASSAASARTARSRVTVGSAPTFRCSNRADKRKEFYLKLEEKHRALEEEENQYKARQKEEEEAAIKQLRKNLVIRAKPVPSFYYEGPPPKVELKKLPLTRPKSPKLTRRKSSGDAISSSSEVCSRQQRHSLVSRKEASNGPVTPKTKEHLLGRKGNGSCEKSKVGNETKSAPPKMTQQTNADISVH 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele16g0064 270 MobiDBLite consensus disorder prediction 46 72 - -
Lele16g0064 270 Coils Coil 116 155 - -
Lele16g0064 270 MobiDBLite consensus disorder prediction 245 270 - -
Lele16g0064 270 Pfam Targeting protein for Xklp2 (TPX2) domain 106 175 IPR027329 -
Lele16g0064 270 PANTHER PROTEIN WVD2-LIKE 3 12 269 IPR044806 GO:0000226|GO:0008017
Lele16g0064 270 MobiDBLite consensus disorder prediction 194 224 - -
Lele16g0064 270 MobiDBLite consensus disorder prediction 167 270 - -
Lele16g0064 270 MobiDBLite consensus disorder prediction 46 73 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele16g0064 Lele-ChrLele16 399884 401718 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele16g0064 16 399884 401718 Lele13g2362 13 29337815 29340987 CCT
Lele16g0064 16 399884 401718 Lele14g2293 14 27671211 27673602 CCT
Lele16g0064 16 399884 401718 Lele15g0057 15 343452 345849 CCT
Lele16g0064 16 399884 401718 Lele16g0059 16 375731 378113 CCT
Lele16g0064 16 399884 401718 Lele06g1194 06 7523029 7526549 CCT
Lele16g0064 16 399884 401718 Lele07g1388 07 8443426 8448133 CCT
Lele16g0064 16 399884 401718 Lele08g1188 08 7514363 7517875 CCT
Lele13g2358 13 29319269 29324212 Lele16g0064 16 399884 401718 hybridization
Lele14g2290 14 27655012 27659773 Lele16g0064 16 399884 401718 hybridization