Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g0058 ATGGAACACGTATCATGTGGGGTGTTGGTCACCGTTTGTGATTTCTTTAAGAGACGCTCCAGATCTATTGTTCAGAGAGGTGCTGAAGGTGGCGTTCATGTTGGAGGGGAAGCAAAGGCACCTTTGTTTCCGCGGAGCTCCATCGGTGGCGGGGGAGTAGATAAATTGCGACAAGTTAAAGCCAAGTACCCAGCTCTCCTTTTCAAACAGCAGCATACAGCATATGTAGAAAAGATATATGGAATGATTCGAGATAACTTGAAGAAAGAGATATCTCCCTTCCTTGGGTTATGCATCCAGGCACCGAGAACGTCCAGAGCAAGCTTGGTTAAAGGACGCTCTGTTGCAAACACGGAGGCCCAGCGAGCTTTGATTGCTCACTGGCAGGGGATAGTGAAGAGCCTCGGGAACTTCCTCAATACTTTAAAAGAAAATCATGTTCCTCAATTTTTAGTTCGGAAGGTGTTCACTCAAATTTTTTCTGTTATCAACGTCCGTCTATTCAACAGTCTTCTTTTGAGATTCGAGTGCTGCTCATTCAGCAGTGGGGAATACGTGAAAGCTGGTTTGGCTGAATTGGAGCACTGGTGTTATAAAGCAACGGACGAGGTAATATCCAATATGAGAGTGCTCATGACTGAAGATTCAAATAATGCAGTCAGTAATTCTTTCCTGTTGAATGATGATTCCAGATTGACAGCTTTCTTAGAAGCAGAACAGCAACTGATTTAA 732 0.4413 MEHVSCGVLVTVCDFFKRRSRSIVQRGAEGGVHVGGEAKAPLFPRSSIGGGGVDKLRQVKAKYPALLFKQQHTAYVEKIYGMIRDNLKKEISPFLGLCIQAPRTSRASLVKGRSVANTEAQRALIAHWQGIVKSLGNFLNTLKENHVPQFLVRKVFTQIFSVINVRLFNSLLLRFECCSFSSGEYVKAGLAELEHWCYKATDEVISNMRVLMTEDSNNAVSNSFLLNDDSRLTAFLEAEQQLI 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele16g0058 243 Pfam DIL domain 155 201 IPR002710 -
Lele16g0058 243 PANTHER DILUTE DOMAIN-CONTAINING PROTEIN YPR089W 69 201 - -
Lele16g0058 243 ProSiteProfiles Dilute domain profile. 46 243 IPR002710 -
Lele16g0058 243 SMART DIL_2 154 230 IPR002710 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele16g0058 Lele-ChrLele16 369675 373629 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele16g0058 50 203 Myosins gene family AT1G54560 87.821 3.91e-88 283
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele16g0058 16 369675 373629 Lele13g1895 13 26716916 26719753 CCT
Lele16g0058 16 369675 373629 Lele14g1833 14 25068165 25071046 CCT
Lele16g0058 16 369675 373629 Lele15g0513 15 2998325 3001155 CCT
Lele16g0058 16 369675 373629 Lele16g0533 16 2950334 2953194 CCT
Lele16g0058 16 369675 373629 Lele16g0058 16 369675 373629 ECH
Lele13g2363 13 29343130 29352612 Lele16g0058 16 369675 373629 hybridization