Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g0041 ATGCATGGGGGACTTTCACCTGACTTGCATCATTTGGATCAAATAAGAAATCTACAGCGACCCACTGATGTGCCAGATACAGGTTTGCTTTGTGATCTCCTTTGGTCAGACCCGAGCAAAGATGTTCAAGGCTGGGGAATGAATGACAGGGGAGTTTCGTATACATTTGGTGCTGATAAGGTGTCAGAGTTTCTTCAGAAGCATGATCTAGACCTTATATGTCGTGCTCATCAGGTTGTAGAGGATGGATATGAGTTCTTTGCTAACCGACAGCTTGTAACAATATTCTCAGCTCCTAATTATTGTGGGGAGTTTGACAACGCCGGTGCCATGATGAGTGTTGATGAGACGTTAATGTGTTCTTTCCAAATATTAAAGCCTGCTGATAAAAAACCGAAGCTCAATTTTGGAAGTACAACCACTGCTAAGCCTGGGAACTCTCCAGCAGGTGTCAAGAGACAAAAGGGTTCTGGCTTCTGGCCATTTTGCCGTGCCTCTGCTATCACACCTGCGAAGACTTTTCCTCAGGGTTCTTCTAAGGAGCATGAGTTTAGACGCCCAAGACAGCAGATTTGA 576 0.4497 MHGGLSPDLHHLDQIRNLQRPTDVPDTGLLCDLLWSDPSKDVQGWGMNDRGVSYTFGADKVSEFLQKHDLDLICRAHQVVEDGYEFFANRQLVTIFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPADKKPKLNFGSTTTAKPGNSPAGVKRQKGSGFWPFCRASAITPAKTFPQGSSKEHEFRRPRQQI 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele16g0041 191 Pfam Calcineurin-like phosphoesterase 1 79 IPR004843 GO:0016787
Lele16g0041 191 PRINTS Serine/threonine phosphatase family signature 12 39 IPR006186 GO:0016787
Lele16g0041 191 PRINTS Serine/threonine phosphatase family signature 91 107 IPR006186 GO:0016787
Lele16g0041 191 PRINTS Serine/threonine phosphatase family signature 69 89 IPR006186 GO:0016787
Lele16g0041 191 FunFam Serine/threonine-protein phosphatase 1 138 - -
Lele16g0041 191 Gene3D - 1 138 IPR029052 -
Lele16g0041 191 SUPERFAMILY Metallo-dependent phosphatases 1 132 IPR029052 -
Lele16g0041 191 MobiDBLite consensus disorder prediction 172 191 - -
Lele16g0041 191 SMART pp2a_7 1 129 IPR006186 GO:0016787
Lele16g0041 191 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 1 132 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele16g0041 Lele-ChrLele16 276687 278160 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele15g0041 15 239525 245291 Lele16g0041 16 276687 278160 ECH
Lele16g0041 16 276687 278160 Lele16g0041 16 276687 278160 ECH
Lele13g2379 13 29426618 29430729 Lele16g0041 16 276687 278160 hybridization
Lele14g2309 14 27780688 27787024 Lele16g0041 16 276687 278160 hybridization