Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g0027 ATGAATTGCTTCTCCTGTTTCTCCTCTCGCAAAAGTAAGAAAAGCCATAACAAGATGGAGCATGGTTCCCCACGGCACGAAAACATTCCGGCTACACCGCCCGATGTGAAGAAACAACAGCCAGAAAACCCAGGCCAAATTGATACGGCAAGTATAAAAGCTCAAACTTACACTTTCCGTGAGCTAGCAACAGCAACAAAGAATTTTAGTCGTGAATGCCTACTGGGTAAAGGTAGCTTTGGCAGAGTGTACAAGGGCACGCTTCCCGCAACCGGCCAGGTGGTAGCCGTGAAGCAACTCGACAGAAATGGGGTGCAGGGCAATAATAAGGAAGTTCTAGTCGAGGTTTTGATGCTAAGTCTCTTGCATTACGAGAATCTAGTTGATCTCATCAGTTATTGTGCCGGCGGGGAGCAACATCTTTTGGTTTACGAATTTGTCACGGGGTTCCCTGGAAGAACATCTTCTCGCGCTAGGATGAAAATAGCGTATAATGCAGCGAGAGCACTGGAGTACTTACTTGCACGACGAGGCGGAGCCGTTTTTCAAAGACCCAAAAAGATTTCCGGATATGGCGGATCCAGATCTGGAGAGAGAATTTCCAGAGAAGGACCTGAATCAAGCGGTGGCAATAGCGGCCATGTGCCTGCAGGAGGAAGCGGGAGCGCGTCCTTTAATTTGATAAGCGACGTGGCAACTGCTCTCAGTTTCCTGAGTTAG 720 0.4847 MNCFSCFSSRKSKKSHNKMEHGSPRHENIPATPPDVKKQQPENPGQIDTASIKAQTYTFRELATATKNFSRECLLGKGSFGRVYKGTLPATGQVVAVKQLDRNGVQGNNKEVLVEVLMLSLLHYENLVDLISYCAGGEQHLLVYEFVTGFPGRTSSRARMKIAYNAARALEYLLARRGGAVFQRPKKISGYGGSRSGERISREGPESSGGNSGHVPAGGSGSASFNLISDVATALSFLS 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele16g0027 239 PANTHER OS07G0668900 PROTEIN 3 175 - -
Lele16g0027 239 Pfam Protein kinase domain 72 172 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele16g0027 239 SUPERFAMILY Protein kinase-like (PK-like) 55 174 IPR011009 -
Lele16g0027 239 ProSiteProfiles Protein kinase domain profile. 69 239 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele16g0027 239 FunFam Somatic embryogenesis receptor kinase 1 36 146 - -
Lele16g0027 239 ProSitePatterns Protein kinases ATP-binding region signature. 75 98 IPR017441 GO:0005524
Lele16g0027 239 MobiDBLite consensus disorder prediction 1 46 - -
Lele16g0027 239 MobiDBLite consensus disorder prediction 190 216 - -
Lele16g0027 239 Gene3D Phosphorylase Kinase; domain 1 39 146 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele16g0027 Lele-ChrLele16 160162 161743 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele16g0027 1 187 Glycoside Hydrolase AT3G07070 47.393 3.83e-52 172
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Lele16g0027 Pkinase 3.4e-11 CL0016