LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele16g0019	ATGCTCTCTTCTCTCTCCCTCCCTTCCCCGCCTAAGCTCCTCTTCCCCTTCAAACCCCAACCCAAACCCAAACTCACAACCATATTCCTTCGTTGCTTCTCTGTTCTATCAGCAGTATCAGGATTACAAGTTACTGAGAAAAAGCTTACTAATGGTGAACTTGTCTTGTCTGCCTGCGTCATATTGGTTGGCCTGTTTGCTTTCCAGCATTGTGGCACCCACAAAGTAGCATTTATGTTTGCACCAATTGTAATAATGTGGCTTGTAACTATTTTCTCTGTTGGACTGTATAATACAATATGCTGGAATCCAAAAATAGTTCGGGCTCTATCCCCACACTATATCATCAAGTTTTTTATCAAGACTGGCAAAGAAGGTTGGATTTCTCTTGGAGGGGTTCTTCTCTGTATCACTGGATCTGAAGCTATGTTTGCTGATCTTGGTCATTTCACCGCTTTTTCAATAAGACTTGCATTTGCTTTTGTTATATACCCTTGTTTGGTGGTACAGTACATGGGCCAAGCTGCTTTCTTATCTAGAAATCTCGGCTCTGTCCATAACAGTTTTTATGACGCAATCCCAAAACCTGTATATTGGCCTGTCTTTGTCATTGGCACCCTTGCTGCTATTGTGGGGAGTCAGGCTGTTATAACTGCCACTTTCTCCATTATCAAGCAGTGCCATGCTCTAGGTTGCTTTCCACGAGTGAAAGTTGTACACACCTCAAAACATATATATGGGCAGATCTATATCCCTGAAATAAACTGGATACTTATGGTCCTGACTCTTGCTATGACAGTTGGATTTCAGGACACGACCTTGATCGGAAATGCTTATGGACTCGCTTGTATAGCAGTTATGTTTGTGACTACATTTCTGATGGCACTTATCATAATCTTCGTCTGGCAGAAAAGTGTCCTGCTTGCTACAATATTTCTTTTATTCTTCTGGGTGATAGAGGGCGCATATTTGTCAGCAGCATTCATAAAAGTTCCCCAGGGAGGATGGGTTCCTCTTGTCCTGTCATTCATCATCATGATTGTTATGTATGTATGGCATTATGTTCCTGTTCCATACGTCTCACCCGAAGAACGTTTCCTCATAGGGCGTGTTTGCCCCAGGCCATATCGTATGTATAGATGCATCATCAGATATGGGTATAAGGACATCCAAAGAGATGACGGAGACTTTGAGAACCAACTCATACAAAGTATAGCAGAGTTTGTCCAAATGGAAGCTACTCAGCCACAACTTTCAAGTTCTGAAAGTTCTTCACTTGACGGGAGGATGGCTGTTATAAGTGTTAGAGGCATAGGATCTACTTCAAGCTTGATAGTGTCCGAGCACGATGATGTTGGCCCGGACATGTCAATCTCTAGCAGTAAGTCTGTTACCCTGCGAAGCTTGCAATCGGTTTATGATGACGAGAACCCACAGGTCAGGAGGCGTCGAGTAAGATTTCAGCTACCTAACAATCCTAGCATGGATCCTGCTGTTAGGGATGAGCTTGTGGATTTGATTCAAGCTAAGGAGGCAGGAGTCGCATATATCATGGGGCACTCATACGTGAAGGCAAGGAAATCGTCCTCATTCTTGAAAAAGCTTGTGATTGATATTGGGTATTCATTTCTTCGGAAGAATTGCAGGGGTCCTTCTGTGGCCCTTAACATTCCTCACATCAGTCTTATTGAAGTTGGAATGATATATTACGTGTAG	1716	0.4301	MLSSLSLPSPPKLLFPFKPQPKPKLTTIFLRCFSVLSAVSGLQVTEKKLTNGELVLSACVILVGLFAFQHCGTHKVAFMFAPIVIMWLVTIFSVGLYNTICWNPKIVRALSPHYIIKFFIKTGKEGWISLGGVLLCITGSEAMFADLGHFTAFSIRLAFAFVIYPCLVVQYMGQAAFLSRNLGSVHNSFYDAIPKPVYWPVFVIGTLAAIVGSQAVITATFSIIKQCHALGCFPRVKVVHTSKHIYGQIYIPEINWILMVLTLAMTVGFQDTTLIGNAYGLACIAVMFVTTFLMALIIIFVWQKSVLLATIFLLFFWVIEGAYLSAAFIKVPQGGWVPLVLSFIIMIVMYVWHYVPVPYVSPEERFLIGRVCPRPYRMYRCIIRYGYKDIQRDDGDFENQLIQSIAEFVQMEATQPQLSSSESSSLDGRMAVISVRGIGSTSSLIVSEHDDVGPDMSISSSKSVTLRSLQSVYDDENPQVRRRRVRFQLPNNPSMDPAVRDELVDLIQAKEAGVAYIMGHSYVKARKSSSFLKKLVIDIGYSFLRKNCRGPSVALNIPHISLIEVGMIYYV	571

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele16g0019	571	PANTHER	OSMOTIC STRESS POTASSIUM TRANSPORTER	31	355	IPR003855	GO:0015079\|GO:0016020\|GO:0071805
	Lele16g0019	571	Pfam	K+ potassium transporter	32	354	IPR003855	GO:0015079\|GO:0016020\|GO:0071805

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele16g0019	Lele-ChrLele16	119595	123080	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele16g0019	356	571	Inorganic Solute Cotransporters	AT3G02050	74.091	3.51e-104	330