Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lele15g2414 ATGGAGCAGAGGTCATCTGCTAAAGATGATCATAATGCTGGTGAATTGGCATTCATTTCCTCTTATTCAGAAGACAGCAGGGATTCTGTGGACAAGTGGATGGCATTTCCTAGCGAATCAAATTTTGCCAATGCTAGCAGCTCAACGAATATGGATAATTTTGGGGCTAACAATGGAAAGAAAGATAATGATGCAAGGGAGCGCCTGAATGAGCAGACACCTTTTGATCGTCAAATTTTAACTGAAGCAAGCATAGCTGAGAGAACTGCTGAATGGGGCCTTGTGATGAACTCAGGTAGTTTTAAAGCAATAGGAGGAGTGCCAACCAGTTCCTCCTTCGATGGTGAAAGAAGCAAAAATTTGTCAGATAGATTTACTGCAGCAGTATCCACAAGGACATCCGAGGAATCAAATTATGAGTCAGAGTCATCGTCAGGGGCATTCCCAAGGGTATCACAAGAGTTGAAGGAAGCCTTGGCGACACTACAACAGACGTTTGTTGTCTCAGATGCAACTAAACCAGACTGCCCAATAATGTATGCCAGCAGTGGATTTTTCAATATGACAGGTTATTCTTCAAAGGAGGTCATTGGGAGGAATTGCCGGTTTCTTCAGGGCCCTGAAACAGACCAGAAAGAAGTGGCAAAAATTCGAGATGCAGTTAAAAATGGGAGAAGCTTCTGTGGCAGGCTTTTAAACTACAAGAAAGATGGAACCCCATTCTGGAATCTTCTCACTGTCACTCCTATAAGGGATAGCCAGGGCAACGTCATCAAATTCATTGGAATGCAGGTTGAGGTGAGCAAATTCACTGAAGGTGTGAATGAAAAGGCGTTACGGCCAAATGGATTGCCCAAATCATTAATTCGTTATGATGCCCGTCAAAAGGAGAAAGCTTTGGGTTCCATCACAGAGGTTGTCCAAACTGTCAGGGACCCAAAATACATCATCCGGCCAGTGAGCCATGACAATTCCAGTAAGCTTGAAGAGCAAGAAAAAATCAATGCTGATTTTGTTTTGCCAAAGTCTGTTGAAATTGAGAGTACTAGTTCAACAAATGGCCAAACTGCTTCACTAGACTTCCAAGGTGATATAAGCAAAAGGAAGTCAGGGCGCGTTTCTTTCATAAGTTTTAAAGGGAGATCTCTAAGCTCTACAGAAAAGCTTGATGAAAAGCCCATTGTTGAGCCAGAGGTTTTGATGACGAAGGACATGGAACGTTCTGACAGTTGGGAGCGTGCTCAAAGAGAGAGGGATATACGACAGGGAATTGATCTAGCAACCACATTGGAGCGCATTGAAAAGAATTTTGTGATTTCTGATCCTAGACTTCCAGACAACCCAATTATATTTGCATCTGATAGCTTTCTTGAACTTACAGAATATACGCGTGAAGAAATTTTGGGAAGAAACTGTCGGTTTCTTCAAGGACCGGAAACAGATCAAGCAACTGTCCAAAAGATTAGAGATGCTATAAGAGAACAGAGGGAAATCACAGTTCAGCTGATAAACTATACCAAGAGTGGAAAGAAGTTCTGGAATTTGTTCCACTTGCAGCCTATGCGTGATCATAAGGGTGAGCTACAATACTTCATAGGCGTCCAATTAGATGGAAGTGATCATGTAGAACCTTTAAGAAACCGCCTATCTGAGAGAACAGAGCAAAAAAGTGCAAAGTTGGTAAAAAAAACTGCAGAAAATGTTGATGAGGCTGTCCGAGAGCTTCCTGATGCCAACACGAGACCTGAAGATTTGTGGGCAATTCATTCTCAGCCTGTCTTCCCTAGACCTCATAAAAAGGAAAGTTCTTCTTGGTTAGCAATACATAAGTTAACTGCAAGTGGTAAAAAAATTGGACTGCATCATTTTAAGCCAATAAGGCCATTGGGTTGTGGAGATACTGGCAGTGTTCACCTTGTGGAGCTTCAAGGCGCAGGTGAACTATATGCAATGAAGGCAATGGAAAAATCAGTCCTGCTAAATCGTAATAAGGTTCATCGAGCATGCATTGAGAGAGAGATTATATCATTGCTGGATCATCCTTTTCTCCCCACTCTATACACTTCTTTTCAGACTTCTACACATGTATGTTTGATAACAGACTTCTTCCCCGGGGGTGAATTGTTTGCATTGTTGGATATGCAACCCATGAAAATTTTCAAGGAGGAATCAGCAAGATTCTATGCAGCAGAGGTTCTTATTGGTTTAGAATATCTCCACTGCTTAGGTATAATTTATCGAGACCTGAAGCCTGAAAATATTTTACTTCAGAAGGATGGTCACATTGTATTAACTGATTTTGATTTATCATTCATGACTGCTTGTAAACCCCAGATTGTGAAGCATCCTCCACCTAGGAGAAAATCGCGTAGTCAACCACCACCAACATTTGTTGCGGAGCCTAATGCACAATCAAACTCCTTTGTTGGAACAGAAGAATACATAGCTCCTGAAATTATAACTGGAGCTGGGCATAGCAGTGCTATAGATTGGTGGGCTCTTGGTACGTTGTTGTATGAAATGCTCTATGGTCGCACACCATTCAGAGGAAAGAACAGGCAGAAGACATTTGCCAACATCTTGCACAAAGATCTAACCTTTCCAAGCAGTATCCCGGTAAGTCTTGCAGGCAGACAGTTGATTAATGCACTATTGCAAAGAGACCCAGCCAACCGTTTAGGTTCAAGTACTGGAGCCAATGAAATCAAGCAACATCCGTTTTTCCGTGGAATCACTTGGCCTTTAATCCGTTGCATGAATCCACCGCCTCTAGAAGCTCCTCTTAAATTAATAGGGAAAGACCCAATACAGAAAGAAGTGAGATGGGAAGATGATGGAGTGCTTGTTCGCTCAATGGATTTGGATATCTTCTGA 2874 0.421 MEQRSSAKDDHNAGELAFISSYSEDSRDSVDKWMAFPSESNFANASSSTNMDNFGANNGKKDNDARERLNEQTPFDRQILTEASIAERTAEWGLVMNSGSFKAIGGVPTSSSFDGERSKNLSDRFTAAVSTRTSEESNYESESSSGAFPRVSQELKEALATLQQTFVVSDATKPDCPIMYASSGFFNMTGYSSKEVIGRNCRFLQGPETDQKEVAKIRDAVKNGRSFCGRLLNYKKDGTPFWNLLTVTPIRDSQGNVIKFIGMQVEVSKFTEGVNEKALRPNGLPKSLIRYDARQKEKALGSITEVVQTVRDPKYIIRPVSHDNSSKLEEQEKINADFVLPKSVEIESTSSTNGQTASLDFQGDISKRKSGRVSFISFKGRSLSSTEKLDEKPIVEPEVLMTKDMERSDSWERAQRERDIRQGIDLATTLERIEKNFVISDPRLPDNPIIFASDSFLELTEYTREEILGRNCRFLQGPETDQATVQKIRDAIREQREITVQLINYTKSGKKFWNLFHLQPMRDHKGELQYFIGVQLDGSDHVEPLRNRLSERTEQKSAKLVKKTAENVDEAVRELPDANTRPEDLWAIHSQPVFPRPHKKESSSWLAIHKLTASGKKIGLHHFKPIRPLGCGDTGSVHLVELQGAGELYAMKAMEKSVLLNRNKVHRACIEREIISLLDHPFLPTLYTSFQTSTHVCLITDFFPGGELFALLDMQPMKIFKEESARFYAAEVLIGLEYLHCLGIIYRDLKPENILLQKDGHIVLTDFDLSFMTACKPQIVKHPPPRRKSRSQPPPTFVAEPNAQSNSFVGTEEYIAPEIITGAGHSSAIDWWALGTLLYEMLYGRTPFRGKNRQKTFANILHKDLTFPSSIPVSLAGRQLINALLQRDPANRLGSSTGANEIKQHPFFRGITWPLIRCMNPPPLEAPLKLIGKDPIQKEVRWEDDGVLVRSMDLDIF 957
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lele15g2414 957 ProSiteProfiles PAS repeat profile. 422 495 IPR000014 -
Lele15g2414 957 ProSitePatterns Serine/Threonine protein kinases active-site signature. 744 756 IPR008271 GO:0004672|GO:0006468
Lele15g2414 957 MobiDBLite consensus disorder prediction 41 64 - -
Lele15g2414 957 FunFam Putative LOV domain-containing protein 707 920 - -
Lele15g2414 957 SMART pas_2 424 493 IPR000014 -
Lele15g2414 957 SMART pas_2 153 222 IPR000014 -
Lele15g2414 957 Gene3D Transferase(Phosphotransferase) domain 1 707 918 - -
Lele15g2414 957 Gene3D Phosphorylase Kinase; domain 1 622 706 - -
Lele15g2414 957 SMART pac_2 499 541 IPR001610 -
Lele15g2414 957 SMART pac_2 228 270 IPR001610 -
Lele15g2414 957 TIGRFAM sensory_box: PAS domain S-box protein 448 540 IPR000014 -
Lele15g2414 957 TIGRFAM sensory_box: PAS domain S-box protein 177 268 IPR000014 -
Lele15g2414 957 MobiDBLite consensus disorder prediction 41 57 - -
Lele15g2414 957 Pfam PAS domain 445 537 IPR000014 -
Lele15g2414 957 Pfam PAS domain 172 268 IPR000014 -
Lele15g2414 957 ProSiteProfiles PAS repeat profile. 151 224 IPR000014 -
Lele15g2414 957 MobiDBLite consensus disorder prediction 1 26 - -
Lele15g2414 957 PANTHER FLIPPASE KINASE 1-RELATED 121 925 - -
Lele15g2414 957 MobiDBLite consensus disorder prediction 779 802 - -
Lele15g2414 957 ProSiteProfiles Protein kinase domain profile. 623 908 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele15g2414 957 Gene3D PAS domain 165 325 - -
Lele15g2414 957 ProSiteProfiles PAC domain profile. 225 279 IPR000700 -
Lele15g2414 957 SUPERFAMILY PYP-like sensor domain (PAS domain) 441 537 IPR035965 -
Lele15g2414 957 FunFam LOV domain-containing protein 622 706 - -
Lele15g2414 957 SUPERFAMILY PYP-like sensor domain (PAS domain) 172 264 IPR035965 -
Lele15g2414 957 SMART serkin_6 623 908 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele15g2414 957 Gene3D PAS domain 411 575 - -
Lele15g2414 957 ProSiteProfiles PAC domain profile. 496 550 IPR000700 -
Lele15g2414 957 SUPERFAMILY Protein kinase-like (PK-like) 600 931 IPR011009 -
Lele15g2414 957 CDD PAS 178 267 IPR000014 -
Lele15g2414 957 FunFam LOV domain-containing protein 411 575 - -
Lele15g2414 957 CDD PAS 445 537 IPR000014 -
Lele15g2414 957 FunFam Putative LOV domain-containing protein 165 321 - -
Lele15g2414 957 Pfam Protein kinase domain 625 908 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele15g2414 957 ProSitePatterns Protein kinases ATP-binding region signature. 629 652 IPR017441 GO:0005524
Lele15g2414 957 CDD STKc_phototropin_like 621 931 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Lele15g2414 Lele-ChrLele15 28413843 28433617 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele15g2414 83 956 AGC Kinase Gene Family AT5G58140 74.858 0.0 1320
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Lele15g2414 Pkinase 3.8e-59 CL0016