Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele15g2400 ATGATGACGTTGCCATATTCTTCATCTCGTTTCTCTACTTGCTGCTTACGCACCAAACCCAAATTCAGTAGTAATCGCTTCATCTCTCAAATTCGAAGCAATGATTCTCCAACAAAACTATCCAATTTCGTCCCATTCCTAATCAAGCAAACCCCAGACGACGCCAACAACAACTTCTTGAAGCGAAGAGAAGCAATAGGGCTTGCCTTTGGATTCGGCCTTTGCAATGTTGTGCTTCATTCTCAGCCGGAAGCCACGTCAGCAGCCGAATCAGCGGCAGCTCCATGCGTACTAAGAGTGGCTGCTTCAGGCATCGCCTTCTGTGATAAACTTGTGGGAAATGGCCCTCAAGCTGAAAAGGGACAGCTCATTAAGGCACATTATGTTGGGAAATTGGAGAATGGGAAAATTTTCGACAGCAGCTATAATCGTGGCAAGCCTCTTACGTTTCGTGTTGGCGTTGGGGAGGTGATCAAAGGATGGCATGAAGGAATATTAGGAGGTGATGGAATACCTCCCATGCTTGCTGGAGGCAAACGAACATTGAAAATTCCTCCACAACTTGCGTACGGCTCAAGAGGTGCTGGCTGTAGAGGAGGTTCATGTGTCATCCCTCCTGATTCTGTCCTATTATTTGATGTGGAGTTCATTAGCAAGGCTTGA 663 0.4661 MMTLPYSSSRFSTCCLRTKPKFSSNRFISQIRSNDSPTKLSNFVPFLIKQTPDDANNNFLKRREAIGLAFGFGLCNVVLHSQPEATSAAESAAAPCVLRVAASGIAFCDKLVGNGPQAEKGQLIKAHYVGKLENGKIFDSSYNRGKPLTFRVGVGEVIKGWHEGILGGDGIPPMLAGGKRTLKIPPQLAYGSRGAGCRGGSCVIPPDSVLLFDVEFISKA 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele15g2400 220 SUPERFAMILY FKBP-like 101 218 - -
Lele15g2400 220 FunFam Peptidylprolyl isomerase 93 219 - -
Lele15g2400 220 Gene3D - 93 220 IPR046357 GO:0003755
Lele15g2400 220 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 121 220 IPR001179 GO:0003755
Lele15g2400 220 PANTHER PHOTOSYNTHETIC NDH SUBUNIT OF LUMENAL LOCATION 4, CHLOROPLASTIC 48 218 IPR044183 GO:0009507
Lele15g2400 220 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 116 217 IPR001179 GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele15g2400 Lele-ChrLele15 28269966 28272411 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele15g2400 119 218 Calmodulin-binding Proteins AT5G48570 43.000 4.21e-17 77.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele15g2400 15 28269966 28272411 Lele15g2400 15 28269966 28272411 ECH
Lele13g0043 13 479739 482626 Lele15g2400 15 28269966 28272411 hybridization
Lele14g0039 14 601170 603374 Lele15g2400 15 28269966 28272411 hybridization