Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele15g2395 ATGAACCCTAAAAATCAGAAATTAATTGCCCCTTTCAATGTGTCCATAAATGCAAATCCAGACAAGAAAACCCAGAAGAAGCACAAATTTGTCCTAGTGAGAAGTTTGAGAGAAATGGATCTTTCTTTGAGTGTTGGGAGTGGCCATGGATCTGGTGATGAGCAAAACAGTGCAAGCTCTCATCAGACAGCTGCAACAAGGAAGCATGCTCATCGTCACACTCCTATGCAGATCCTGCGACTTGAAGAGTTTTTCAAGAACTACCCACATCCTGATGAGGAACAACGCAAGGATTTAGGCAGGGAGCTAGGGCTTGAACCCAAACAAATCAAGTTCTGGTTTCAGAACAAGAGAACTCAAACCAAGACACTGAATGAACGGATTGATAACAATGTTCTTCGTGCTGAGAACGAAAGAATACAGTCTGAGAACTCAGCAATCAAAGAGGTTCTCATGAATGTAGCTTGCCCTGCTTGTGGCGGTCCCACCTATGGAGACGAAGAACACAGGCTTAATATGCAGAAACTGTTTCAAGAAAATGCATATCTCAAACAAGAGTATGAAAGAGCAACAAGGCTTTTAGCGGACTATGTTGGGAAACCTGATCTGATAATGCAAAAGAGTTTCCTAAGCCTAGGAACTCCATCATCATCAACATCAGAACATGGCCTGACCCTGTCCATTTCTGATGATAACACTAACATGTTGCCACCAACAAACAACAAGAAGCAGGGAGTGAATTGGGAGACGGCCATTAGCGCCCTGGAAGAACTCATGAGGCTTGTTCGTGTAGAGGAGCCGCTGTGGGTCCCATCCGATGCATACGGCGAGGTCCACGGAGTGGTCTTCTTCCTTCCTAACCGGGAAATCTATGAAAGGATATTCCCTAGGGCTCATCACCTCGGCAAGAAGCTCACTAATGCTCGTGTCGAATGTTCTAAAGCTTCTTGTGTCGTCAACATGACTCCCTTGCAATTGGTTCCCATGTTTCTAGACTCTGACAAATGGGTTAATCTGTTCCCAACAATTGCTGGAAAAGCCCGCACTATCAAAGTGATTGAAGCTGGTTTGCCTGTGAGTAGGAATGGAGCCTTGCAGCTGATGTATGAAGAACTTCACATGCTTACGCCATTGGTGCCACCTCGGGAATTTGTGTTCCTTCGATACTGTTACCAAACGGACAAGACAACATGGGTGATAGCTGATGTGTCCTATGATTCACCTGAAGACATCCATTTTACTTATAATGCCTCTTGCTGGAAGCTTCCTTCTGGTTGCATGATTCAAGAACTGTCCAATGGCTTCTCCAAGGTTACATGGGTGGAACACGTGGAAGTGGAGCACCAAGCCCTAATAGTGCACATGCTATACAGAAACCTTGTTTCTGGCGGCATTGCTTATGGAGCTCAACGATGGGTTGTGGCACTTGAGAGAATGTGTGAGAGAATTGGTTACACCATAAGCCGTCAGATTCCTGTTGATGAAGCTGCGTCTTCAGTGATGAGCATACCAGATGGAAGAAGGAGCCTCATGAAGCTAGGGCATCGAATGTTAAAGAGCTTCTGTGGAGCGATGATAGGCATGAACAACAAAGGAAGAGAACAAGAATTTGCCCACATCAGTGAGGACAATGAGTTTGGTGTCAAAGTTTTCATTCGTCACAACCTCGAAAGGGGTCAACCTCAAGGCACCATTCTCACCGCCGCCGCTCCTCTTTGGCTCCCTATTTCTCCCCACCACATGTCCCTCTTCCTCCGCGACATTGCTCGACGATTCCAATGGGATGTTCTTTGCCATGAAAATTCGGGGCATGAGGTTGTACGTATCTCAACTGGAACTCATCCTGGAAACTACGTATCAGTTATCCAGACAAACAATAGTGAGAATGACAGCCTTGCGATTCTTCAAGAAACTTTTGTCGAGCCGATGGGATGTCTGCTGGTGTACGCTCCTTTGGACAACAGGACGATGAATGCGGTCATGCAAGGGGAGGACTCGACCACCGTGTCGATGCTGCCGTCCGGCTTGGTGGTCGTGAGGGACAACATGGGAAGATCCGGCGGGGGGTCGATACTGACGATGACTTTGCAGATTATGGTGAGTAGCAGTGTGGAAATGACGAACATGAACATGGAGAGCGTGAATAAGGTGAACAACCTCGTGAACAGCACTCTCAGTAAGATCAAGTTTGCTATCATGAAGAATTAG 2208 0.4651 MNPKNQKLIAPFNVSINANPDKKTQKKHKFVLVRSLREMDLSLSVGSGHGSGDEQNSASSHQTAATRKHAHRHTPMQILRLEEFFKNYPHPDEEQRKDLGRELGLEPKQIKFWFQNKRTQTKTLNERIDNNVLRAENERIQSENSAIKEVLMNVACPACGGPTYGDEEHRLNMQKLFQENAYLKQEYERATRLLADYVGKPDLIMQKSFLSLGTPSSSTSEHGLTLSISDDNTNMLPPTNNKKQGVNWETAISALEELMRLVRVEEPLWVPSDAYGEVHGVVFFLPNREIYERIFPRAHHLGKKLTNARVECSKASCVVNMTPLQLVPMFLDSDKWVNLFPTIAGKARTIKVIEAGLPVSRNGALQLMYEELHMLTPLVPPREFVFLRYCYQTDKTTWVIADVSYDSPEDIHFTYNASCWKLPSGCMIQELSNGFSKVTWVEHVEVEHQALIVHMLYRNLVSGGIAYGAQRWVVALERMCERIGYTISRQIPVDEAASSVMSIPDGRRSLMKLGHRMLKSFCGAMIGMNNKGREQEFAHISEDNEFGVKVFIRHNLERGQPQGTILTAAAPLWLPISPHHMSLFLRDIARRFQWDVLCHENSGHEVVRISTGTHPGNYVSVIQTNNSENDSLAILQETFVEPMGCLLVYAPLDNRTMNAVMQGEDSTTVSMLPSGLVVVRDNMGRSGGGSILTMTLQIMVSSSVEMTNMNMESVNKVNNLVNSTLSKIKFAIMKN 735
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele15g2395 735 SUPERFAMILY Bet v1-like 250 484 - -
Lele15g2395 735 SMART HOX_1 66 128 IPR001356 GO:0003677
Lele15g2395 735 FunFam Homeobox-leucine zipper protein HDG1 52 140 - -
Lele15g2395 735 MobiDBLite consensus disorder prediction 48 64 - -
Lele15g2395 735 ProSiteProfiles 'Homeobox' domain profile. 64 124 IPR001356 GO:0003677
Lele15g2395 735 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 66 732 IPR042160 -
Lele15g2395 735 Coils Coil 173 193 - -
Lele15g2395 735 Gene3D - 44 123 - -
Lele15g2395 735 SUPERFAMILY Bet v1-like 543 723 - -
Lele15g2395 735 SMART START_1 249 482 IPR002913 GO:0008289
Lele15g2395 735 MobiDBLite consensus disorder prediction 43 75 - -
Lele15g2395 735 CDD START_ArGLABRA2_like 249 481 - -
Lele15g2395 735 Gene3D - 297 477 IPR023393 -
Lele15g2395 735 Pfam START domain 251 482 IPR002913 GO:0008289
Lele15g2395 735 CDD homeodomain 67 122 IPR001356 GO:0003677
Lele15g2395 735 SUPERFAMILY Homeodomain-like 49 124 IPR009057 -
Lele15g2395 735 Pfam Homeodomain 68 122 IPR001356 GO:0003677
Lele15g2395 735 ProSiteProfiles START domain profile. 240 485 IPR002913 GO:0008289
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele15g2395 Lele-ChrLele15 28231039 28237663 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele15g2395 62 732 Homeobox Transcription Factor Family AT1G73360 40.563 1.41e-174 516
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Lele15g2395 START 2.5e-36 CL0209
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele13g0047 13 513266 520389 Lele15g2395 15 28231039 28237663 hybridization
Lele14g0044 14 649101 654896 Lele15g2395 15 28231039 28237663 hybridization