Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele15g2394 ATGAGAATGATTACCGCCACTGAAATTAGGATTGCCAAAAGAAATGCAGGAAAAAAGACACAAAGCCTACTAGTCACAGCATCTTCTCTAAAAACCAGGTTCAATTTCCCTCTTCTCGTTCCTCTCTTTCCATCACTTTCAAATCTCAAGTTTTTCATCAATTTTGGATATTCAAAGCAGTTGAGAGGATTTGGCCATGGCTCCCGGCGACCCAACTTCTCATTTTGCCGCGACTCCGAAAGCAAAGTTCGACCCACCAGAGCTTCTGTTGATACAGCCCCATTCCCCTTGTTCCAATCTCCCAAAGTTGAAGAGTCATTGTCTGAGTTGGAGCATGCAGACCCAGATTTCTACAAGATAGGTTATGTTCGAAGCATGCGAGCTTATGGAGTTGAGTTTAAGGAAGGGCCTGATGGGTTTGGTGTGTATGCTTCTAAAGATGTAGAACCTCTTCGCCGAGCCAGGGTTATTATGGAAATTCCTCTTGAATTGATGTTAACCGTGAGTCATAAGCCCCCATGGATGTTCTTCCCTGATATAATTCCAGTGGGACATCCAATATTTGATATTATCAACTCAACAAATCCAGAGACAGATTGGCACCTAAGATTAGCATGCCTGCTGTTATATGCACTGGACTGTCAGGAAAACTTTTGGCAGTTGTATGGTGACTTCTTACCCAGTGCTGATGAATGCACTAGCCTACTTCTGGCAACGGAGGAGGAACTTTTGGAGCTGCAGGATCCAAATCTTGCTTCTACCAGCAAGCACCAGCAACGTCATGCCTTGGAATTCTGGGAGAAGAATTGGCACAATGGTGTTCCCCTTAAAATAAGGCGTCTTGCTCGTGATCCTCAAAGGTTCATGTGGGCAGTAGGTATGGCACAATCACGATGCATTAACCTGCAAATGAGGCTTGGCGCACTACATCAAGATGCAAATATGCTGATTCCTTATGCTGATGAATTTGTTTGGTGGTTTGAATTACGGTACGACCGGATGCTTGAGGTGCTTATAAATGCTGGACAGAGGATTAGAAAGGGAGATGAGATGACGGTTGATTACATGAGCAGACAAAAGAATGACATGTTTATGCAAAGATATGGCTTCTCATCATCTGTGAATCCTTGGGATGAGATCAAATTCTCTGGAGATGCACGTATACATTTGGATTCCTTCTTGTCCGTGTTCAACATATCTGGCCTGCCTGAAGAGTATTATCATAACACTCCACTATCTAACGAGGGCAATACTTTTGTTGACGGAGCAGTCATAGGCGCAGCACGAACGCTGCCAACTTGGTCAGATGGGGATGTACCTCCAATTCCTAGTGTGGAACGGAAGGCTGTGAAGGAGTTACAAAATGAATGCCAACAAATGCTGGCAGAATTCCCCACAACCTCCAAGCAAGACCAAAAATTGCTAGTTAAGTTTGATTTTCTTAGTCTGACGCTACTAAAGGCATTGTATCTATTCTTATTTCATCCCAAAATTTCTTCTTGGGGAATCTTTTATCAGATTGAAAATTCATCATATCAGACTCTTGAAGCTGCAATAAAGTACAGATTGCACCGGAAATTGTTATTTCGTGCTTCTTTCTATGGTTTTTCACTCTTTCTACCTCTTCATGATGCCCCAGTTATCATTTCGAACACCTTGAAGGCACCCTCAATCTCTCCACATTTCCCATACATATTAACAAGGGAATTAGCCACAGTCACAGAAGACAAAGCATACCCAAATTTCACCAATGGGTATGTATCTGTTTACCTAAATCCAAATCCTGAATACCCGCTGCGGCTTTTAGAACAGCAGGGAAAGCGAAATTGTCGGGTTGAACATCCGACAGGGTCATCATTTTTATATACGCGAAAATGGCTTGGTCGAACAGATTGGACCGAGCCAGTGAGCGAAGCTCTTCGATCCATGAAAAAGGAGAACGAGATTGTGATATAG 1956 0.431 MRMITATEIRIAKRNAGKKTQSLLVTASSLKTRFNFPLLVPLFPSLSNLKFFINFGYSKQLRGFGHGSRRPNFSFCRDSESKVRPTRASVDTAPFPLFQSPKVEESLSELEHADPDFYKIGYVRSMRAYGVEFKEGPDGFGVYASKDVEPLRRARVIMEIPLELMLTVSHKPPWMFFPDIIPVGHPIFDIINSTNPETDWHLRLACLLLYALDCQENFWQLYGDFLPSADECTSLLLATEEELLELQDPNLASTSKHQQRHALEFWEKNWHNGVPLKIRRLARDPQRFMWAVGMAQSRCINLQMRLGALHQDANMLIPYADEFVWWFELRYDRMLEVLINAGQRIRKGDEMTVDYMSRQKNDMFMQRYGFSSSVNPWDEIKFSGDARIHLDSFLSVFNISGLPEEYYHNTPLSNEGNTFVDGAVIGAARTLPTWSDGDVPPIPSVERKAVKELQNECQQMLAEFPTTSKQDQKLLVKFDFLSLTLLKALYLFLFHPKISSWGIFYQIENSSYQTLEAAIKYRLHRKLLFRASFYGFSLFLPLHDAPVIISNTLKAPSISPHFPYILTRELATVTEDKAYPNFTNGYVSVYLNPNPEYPLRLLEQQGKRNCRVEHPTGSSFLYTRKWLGRTDWTEPVSEALRSMKKENEIVI 651
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele15g2394 651 CDD SET_LSMT 130 370 - -
Lele15g2394 651 SUPERFAMILY RuBisCo LSMT C-terminal, substrate-binding domain 367 529 IPR036464 -
Lele15g2394 651 SUPERFAMILY SET domain 138 370 IPR046341 -
Lele15g2394 651 Gene3D set domain protein methyltransferase, domain 1 123 370 - -
Lele15g2394 651 FunFam Protein PLASTID TRANSCRIPTIONALLY ACTIVE 14 123 370 - -
Lele15g2394 651 PANTHER UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE 95 483 - -
Lele15g2394 651 Pfam SET domain 139 355 IPR001214 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele15g2394 Lele-ChrLele15 28206642 28217012 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Lele15g2394 SET 3.3e-06 No_clan