Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele15g2391 ATGGAGGGTTTTCACCCACTTATGACTTCGTCTTCTTCACCATTTGCTTACACTTTCAATCTCAGTGCTGGTTCTGGTGTCTCATCTTCTTCAAGCGCATACACGACTCCATGGATGGACTTTAGAATATGGAGCAAGCTTCCACAGAGAATTCTTGACAGAATCTTGGTTTTTCTTCCACCACCTGCTTTCTTCAGAGCACGTTGTGTCTGCAAGAGATTCTATGGCCTCTTATTTTCCAACACTTTTCTTCAACTTTACCTCCAAATCTCACAACCCCACCATTGGTTCATTTTCTTCAACCTCAACAAGAGCCTCAAGAGCAGCCATATCGTCTACGCTAAGAACCCTAGTTCCAGTGGTGGAAGTGGAAGTGGAAGCAGTAGTGGTGGTGGAACTATTACGACTACGAATACGGCTACTACTACTACACACTGTTGTGAAGCTTACCTATTTGATCCTTATGAAATCTCTTGGTACCGGGTTCCATTTCCTCTTCTTCCTTCTGGTTTCTCTCCATCTTCTTCTTCCTCAGGCTTGGTCTGTTTTGTTTCGGACGAAGCTGGTCCCAAGACTCTTATTCTCTCCAATCCCATACTTGGTACCATAACTCAACTTCCTCCCACAATAAGACCAAGACTCTTCCCTTCCATTGGCCTAGCGATTTCCCATTCCTCCATAGATCTCACTGTTGCAGGTGATGACATGATTTCCCCTTATGCTGTGAAAAACCTAACATCCGAAAGCTTCCATATTGACTCTAGTGGGTTTTATTCCATATGGGGGACCACATCTTCTCTTCCTAGACTCTGTAGTCTGGAATCTGGGAAGATGATTCAAGCAGGAGGAAGATTCTACTGCATGAACTACAGCCCTTTTAGTGTTTTATGTCACGATATTTCATCAAACACTTGGAGTAAAATCCAAGCACCGATGAGGAGATTCTTAAGGTCTCCGAGTTTGATTGAAAGCAAAGGGAAGTTACTGTTAGTTGCGGCAGTTGAAAAGAGCAAGCTTAATGTTCCGAGGAGTTTAAGGGTGTGGATTCTTCAGGCTTGTGGGACAACATGGGTTGAAACAGAGAGAATGCCTCAGCAACTTTATGTGCAATTTGCAGAATTAGAAGGAGGGAATGGTTTTGATTGTGTAGGGCATGGTGAGTTTATTGTGTTAATGATTAAAGGAACAGATAAGGCTTTGTTGTTTGATATCTGCAGAAAGAGATGGCAATGGATTCCACCATGTCCTTACGTTGTTGCTTCAAGTGCTGGTGGTTCTGCTTTGCATGGCTTTGCTTATGAGCCTTCACTTGCCACCCCAGTTACTGCCCTTCTGGATCAACTAGCACTTCCATTTTAG 1359 0.4356 MEGFHPLMTSSSSPFAYTFNLSAGSGVSSSSSAYTTPWMDFRIWSKLPQRILDRILVFLPPPAFFRARCVCKRFYGLLFSNTFLQLYLQISQPHHWFIFFNLNKSLKSSHIVYAKNPSSSGGSGSGSSSGGGTITTTNTATTTTHCCEAYLFDPYEISWYRVPFPLLPSGFSPSSSSSGLVCFVSDEAGPKTLILSNPILGTITQLPPTIRPRLFPSIGLAISHSSIDLTVAGDDMISPYAVKNLTSESFHIDSSGFYSIWGTTSSLPRLCSLESGKMIQAGGRFYCMNYSPFSVLCHDISSNTWSKIQAPMRRFLRSPSLIESKGKLLLVAAVEKSKLNVPRSLRVWILQACGTTWVETERMPQQLYVQFAELEGGNGFDCVGHGEFIVLMIKGTDKALLFDICRKRWQWIPPCPYVVASSAGGSALHGFAYEPSLATPVTALLDQLALPF 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele15g2391 452 Pfam F-box domain 44 75 IPR001810 GO:0005515
Lele15g2391 452 ProSiteProfiles F-box domain profile. 41 90 IPR001810 GO:0005515
Lele15g2391 452 PANTHER BNACNNG10540D PROTEIN 28 439 - -
Lele15g2391 452 Gene3D - 111 433 IPR015915 GO:0005515
Lele15g2391 452 FunFam protein UNUSUAL FLORAL ORGANS 40 84 - -
Lele15g2391 452 Gene3D - 42 85 - -
Lele15g2391 452 SUPERFAMILY Galactose oxidase, central domain 149 418 IPR011043 -
Lele15g2391 452 SMART fbox_2 47 87 IPR001810 GO:0005515
Lele15g2391 452 SUPERFAMILY F-box domain 37 101 IPR036047 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele15g2391 Lele-ChrLele15 28174732 28176090 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele15g2391 15 28174732 28176090 Lele15g2391 15 28174732 28176090 ECH
Lele13g0052 13 583261 584607 Lele15g2391 15 28174732 28176090 hybridization
Lele14g0049 14 724679 726040 Lele15g2391 15 28174732 28176090 hybridization