Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele15g2383 ATGGTCTTTGCAGCAGCCTTTATGCATGAAGATGGCCATTTTTCTTTCTCCAAGAAGAGGCTGAGAGTATCAGATTTTGGATATCAAGATCTAAATCCACATGCATATGCAGGATGTTTCAGTGATGCGCCATTGCCTTCACATCTGGGTGTAGAAAGGGATACCGGTGATATTCCCTCTTGTTCCAGTCTTGATGATAGAGTTGATTCAGATTCTGGATTGGATATGAGCTGCCAGTCAAATATTAAAAGCGTTGATATTCCTGTATGCTTTACAACAGGAAATATTTCATTACAGGATCAGGGCCATGCTGGCTATATGCAGCCTGCTTTTGTTAGTGGATGGATGTATGTCAATGAAAATGGGCAAATGTGTGGTCCCTATGTTCAGGAGCAACTATACGAAGGATTAACTACTGGCTTCTTGCCAGTTGAGCTTCCTGTGTATCCTGTGATCAATGGAACATTAATGAACGCTGTACCATTGAATTACTTCAAGCAGTTTCCTGACCATGTTTCCACAGGTTTTGTATATCTGAGCATGAGTAGCTCAGTCATAACCATGCCTACAGGTTGCTCCACATCATCTGGTAAGGATATGACATCATTTAGACAAGGATCCTTTGAGCATGCTCCTCCTGTAGCTGTCAACCTTGATTCACAGTCAGTTTCCCTGTCACATGTCAACAACACCAGTAAGGAATTCTTGACATCGAACTCAAAGTTACATGAAGAATGCTGTTGGCTTTATGAGGATGAAAAGGGAATGAAGCATGGACCACATTCCATTTTGGAATTAATTTCCTGGAATCATTATCGACATCTCCGAGATTCATCAGTGATTCATCATGCTGAAAATAAGTGTAGCCCCTTTGTCCTTTTGTCTGCTATAAATGCATGGAAAACAGGAAAGCTTGAAAACATCTGTAGATCAGATTCCAAAAGTGACGGGGCTTGTAGTGATACCAGAAGCTTCATCTATGAAATATCTGAGGACATTTCTTCTCAGCTGCATTTGGGAGTCATGAAAACTGCCCGCAGGGTGGTGTTGGATGAGATTATCAGTAACACCATTGCAGAATTTGTTACTGAAAAGAAATCTCGGAGGCATAAGCATGACTCAGTTGATCAGCCTTCTGAGACTAGCTTGTTAGGCTGCAGAATGACTGAGGCTGCTGTGGGGATGAGAAAAGGTACTGTTCTTACAAGTGAGCCAGCATCTTCCCAAATGCTTGATGATCAGTCTTCTTGTGAAGTTTCCAGGGTGTCTCCAATAAGCGCTAAATCCGTTGGAAGCATTGAAAACTTTTGGTGGTCATATGCTGTTGTTCGTAAAGTACTTTGTGATTATTGCATGCAAGTCATGTGGAATGCTGTGGTTTATGATTCTATGGCGGAGTACATACATAACTGGAGAAAGAGAAAACTTTGGTCTATTTGTCCTAATCCTCAACCATCTACTAATGGATGTAAAGATTATGGTGGAATGATCACATCAGGAGAAGCTTTGCTTCCCAGGCCTGGTTCCTCTGAACATGATGCTATTCGGCATCCTCATTGTGAAGGGGTGGCAATGGAGAGAGACTATCTTATTCAATCGTCTTCTATGTCTTCTGTTGTCTTGAAAGATGGAAACATTTCAGAAAATGGAAGAGTGTCATGTTCTGATCGTGATCGTATAGATTTGATATGCATTCTTGAAAGTGTGGAGAATGAGCTTCACACGATGTCTGTGGCATCTTTAACTGAATACATTCAACGTTTAGTTGACAAGGAAGTGAAAAGATTATTTAATTGTCCTGAAGAAGACAACTTGAGCAAGGATGCTTTCAGCAATGACATTTTTCCAGAGATATCTTGTGACAAAACATCTGAAGAGGGGATTTTATCTGACAATAAGGTTGCTATGAAAGAAGGAAATAGTCTTGAAGATTCCATATCTGGAAACCGTATGTCTACTTTATTATCAAGTGCATTTCAGGAGTTGCATGCCAATGTAGGTGATGTGGTTAATGAAAAGGAGATTGGTGACATATCACCTCCTGGATGCGAAAAGAATTCAAAAACTATTGTCCCACAATACAATTATAAGTATCGACCTTCAAGATTAGTCGAAAGTGTTCCTAAGATAACAAAATATGTTACGACAGCCCTATGCCGACAGAAGTTGTATTCTGAGGTTCTTGAAGAGTGGAAATCTTTGTTTCTTGATGCTGCATTCAATCAAGTTTTTGCATCATTCTGCACTACAAAGAAAGTCAGCCAGCCTGATGGTTACATGGAAGGGAAAGTACTGTATTCATCTAAGGAACATTTGAATGATCCAACTCTGGGAAGGATGAAGAAAATACCCAAGAATTCTTCATCAGAAGATTCTCGGATGGTTGGGAAATATACATATCATCGCAAGAAGTTGCCACAGAAAGAGCGAGGTTCTTCTCAACTCATAGCTGTGTCTGTCAAAAAGCAAGTGGATAAGCAGAAGAAACATGTGGATAAGAAGAAACGTGTTTCTGGGGATTTGGATGAGTCTGCCAAAGTTGGAATATCTCCTGATAAAACTGTGCAGACTAAGCTGATAAAAGGGAAGAAGGATAAACAGGCTAATGGAAAGTCTCTTGCTGTCAGTGCTAAAAGAAACTTGCAGAGTAAGAAGTCATCTATAAATAATGCGACTAGTAAAAAATTATTGAAGCATTCGCAGGAAGTCCAAGATGATGTCAAGGATGATGAGAAAAGTAATGTAGAGAAGATTTTAGCCGTTGTAGAAAATAGTGTGGGCAAGAAGTTTGTTGATAGAAATGGTCGCGATGGTGCCATTCATGGAAAGTCCATGCGATACTGCTCCAGGGAAACTCTTAACTCAACCAATAAAGTATCAAAACCAAAAAGGAAGCTTCTAGCGGATGATGGGCCATCCTCACGTCCTTCAAAGGCTTTGAAAATTGCTTATGATGGTTCAAAGGGTGGAGTTGGTGGACCCACCATGTCAAAGACGAGGTCTGCTAAATCCAAGCCATTGAATTTATGTCCTAGATCTGATGGATGTGCCAGGACTTCTATTGATGGGTGGAAATGGCATGAATGGTCTGTGAATGCCAGTTCTGCTGATAGAGCATGTGTTAGGGGAGCAGTGTATGTTCAAAAGAACTGTATACAATCTGATAGTAACCCAACTCATTGGTCAAATTGTAAGGGTCTTTCTGCACGGACAAATAGAGTGAAAATGCGTAACCTTCTTGCAGCTGCAGAAGGTGCTGATCTTCTGAAAGCCACTCAATTGAAGGCGAGGAAAAAACGTTTATGTTTTCAAAGAAGTAAAATACATGACTGGGGTATTGTTGCCTTGGAGTCAATAGAGGCAGAGGACTTCGTGATTGAATATATTGGAGAACTAGTCCGGCCTCGGATATCTGATATACGTGAACGTCAGTACGAAAAGATGGGAATTGGCAGCAGTTACTTGTTTAGACTTGATGATGGTTATGTGGTTGATGCTACGAAAAGAGGTGGGATTGCAAGATTTATAAATCATTCTTGTGAGCCTAACTGCTATACCAAGGTCATATCTGTTGAGGGTCAAAAGAAGATTTTCATATATGCAAAACGTCATATAGCTGCTGGTGAAGAAATTACATACAATTATAAATTTCCTTTGGAGGAGAATAAGATTCCCTGCAACTGTGGCTCCAAAAAGTGTCGTGGATCACTGAATTAG 3717 0.4041 MVFAAAFMHEDGHFSFSKKRLRVSDFGYQDLNPHAYAGCFSDAPLPSHLGVERDTGDIPSCSSLDDRVDSDSGLDMSCQSNIKSVDIPVCFTTGNISLQDQGHAGYMQPAFVSGWMYVNENGQMCGPYVQEQLYEGLTTGFLPVELPVYPVINGTLMNAVPLNYFKQFPDHVSTGFVYLSMSSSVITMPTGCSTSSGKDMTSFRQGSFEHAPPVAVNLDSQSVSLSHVNNTSKEFLTSNSKLHEECCWLYEDEKGMKHGPHSILELISWNHYRHLRDSSVIHHAENKCSPFVLLSAINAWKTGKLENICRSDSKSDGACSDTRSFIYEISEDISSQLHLGVMKTARRVVLDEIISNTIAEFVTEKKSRRHKHDSVDQPSETSLLGCRMTEAAVGMRKGTVLTSEPASSQMLDDQSSCEVSRVSPISAKSVGSIENFWWSYAVVRKVLCDYCMQVMWNAVVYDSMAEYIHNWRKRKLWSICPNPQPSTNGCKDYGGMITSGEALLPRPGSSEHDAIRHPHCEGVAMERDYLIQSSSMSSVVLKDGNISENGRVSCSDRDRIDLICILESVENELHTMSVASLTEYIQRLVDKEVKRLFNCPEEDNLSKDAFSNDIFPEISCDKTSEEGILSDNKVAMKEGNSLEDSISGNRMSTLLSSAFQELHANVGDVVNEKEIGDISPPGCEKNSKTIVPQYNYKYRPSRLVESVPKITKYVTTALCRQKLYSEVLEEWKSLFLDAAFNQVFASFCTTKKVSQPDGYMEGKVLYSSKEHLNDPTLGRMKKIPKNSSSEDSRMVGKYTYHRKKLPQKERGSSQLIAVSVKKQVDKQKKHVDKKKRVSGDLDESAKVGISPDKTVQTKLIKGKKDKQANGKSLAVSAKRNLQSKKSSINNATSKKLLKHSQEVQDDVKDDEKSNVEKILAVVENSVGKKFVDRNGRDGAIHGKSMRYCSRETLNSTNKVSKPKRKLLADDGPSSRPSKALKIAYDGSKGGVGGPTMSKTRSAKSKPLNLCPRSDGCARTSIDGWKWHEWSVNASSADRACVRGAVYVQKNCIQSDSNPTHWSNCKGLSARTNRVKMRNLLAAAEGADLLKATQLKARKKRLCFQRSKIHDWGIVALESIEAEDFVIEYIGELVRPRISDIRERQYEKMGIGSSYLFRLDDGYVVDATKRGGIARFINHSCEPNCYTKVISVEGQKKIFIYAKRHIAAGEEITYNYKFPLEENKIPCNCGSKKCRGSLN 1238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele15g2383 1238 SMART PostSET_3 1222 1238 IPR003616 -
Lele15g2383 1238 MobiDBLite consensus disorder prediction 861 893 - -
Lele15g2383 1238 Gene3D - 231 323 IPR035445 -
Lele15g2383 1238 SUPERFAMILY GYF domain 243 297 IPR035445 -
Lele15g2383 1238 SMART set_7 1099 1222 IPR001214 GO:0005515
Lele15g2383 1238 Gene3D SET domain 1008 1238 IPR046341 -
Lele15g2383 1238 Pfam SET domain 1111 1215 IPR001214 GO:0005515
Lele15g2383 1238 MobiDBLite consensus disorder prediction 873 893 - -
Lele15g2383 1238 MobiDBLite consensus disorder prediction 823 849 - -
Lele15g2383 1238 MobiDBLite consensus disorder prediction 952 1006 - -
Lele15g2383 1238 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETD1 964 1238 IPR044570 GO:0042800|GO:0051568
Lele15g2383 1238 MobiDBLite consensus disorder prediction 775 794 - -
Lele15g2383 1238 ProSiteProfiles SET domain profile. 1099 1216 IPR001214 GO:0005515
Lele15g2383 1238 ProSiteProfiles Post-SET domain profile. 1222 1238 IPR003616 -
Lele15g2383 1238 CDD SET_SETD1 1087 1234 - -
Lele15g2383 1238 SUPERFAMILY SET domain 1094 1235 IPR046341 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele15g2383 Lele-ChrLele15 28041843 28050991 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele15g2383 1105 1238 C2H2 Transcription Factor Family AT2G23740 38.462 4.40e-19 92.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Lele15g2383 SET 2.4e-21 No_clan