Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele15g2378 ATGAGTGAGAGTGGTGAGAAACCTGCATGGCTAGAGAGGCTCATGGCGGAGACATTCTTTGGTGGGTGTGGGGTCCACCAGAATCGCAGGAAGAACGAGAAGAACGTTTTTTGCTTGCACTGTTGCCTTAGCATCTGCCCTCACTGTCTCCCTTCGCATCCCTCTCATCCTCTTCTCCAGGTGAGAAGGTATGTGTACCACGACGTCGTTCGACTGGGTGATCTGGGAAAGCTCATTGATTGTTCCAATATTCAGGCATATACGATAAACGGAGCGAAGGTGATATTCATAAGGCAGAGGCCACAGTCACGGCCATGCAAAGGCTCAGCCAATGCTTGCTGTACCTGCGATCGCATTCTTCAGGACCCCTTCCTCTTCTGTTCTCTCTCTTGCAAGGTAGATCACATGGTGGAGGAAGGGGAGGACCTGTCCGGCATCTTGCATCAATTCTGCCATTCCGACTTAGCCTTCTCCCACTTCGAGGCCACCTCATCCGACCAGGATTCCCAGATTGCTCCTCCCTCCTCCTACGGCTCCTCTGGCAATTCTGTCATTTCACCCCTCCGCCTCCCCCGCCTCGTCCTCTCCCTGGGCGGCAGAAGGAAGGGCGCACCTCAACGAGCCCCACTCTCCTAA 636 0.544 MSESGEKPAWLERLMAETFFGGCGVHQNRRKNEKNVFCLHCCLSICPHCLPSHPSHPLLQVRRYVYHDVVRLGDLGKLIDCSNIQAYTINGAKVIFIRQRPQSRPCKGSANACCTCDRILQDPFLFCSLSCKVDHMVEEGEDLSGILHQFCHSDLAFSHFEATSSDQDSQIAPPSSYGSSGNSVISPLRLPRLVLSLGGRRKGAPQRAPLS 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele15g2378 211 Pfam PLATZ transcription factor 62 133 IPR006734 -
Lele15g2378 211 MobiDBLite consensus disorder prediction 166 185 - -
Lele15g2378 211 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 3 210 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele15g2378 Lele-ChrLele15 27964201 27968690 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Lele15g2378 PLATZ 4.7e-27 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele15g2378 15 27964201 27968690 Lele15g2378 15 27964201 27968690 ECH
Lele13g0065 13 795403 799888 Lele15g2378 15 27964201 27968690 hybridization
Lele14g0064 14 1321137 1325357 Lele15g2378 15 27964201 27968690 hybridization