Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele15g2374 ATGGGAACTTTAGTCAAATTAGCACGGCTCCATCTTGGACACAACTCCTTTTCTGGTCATATTCCACCCCAAATTGGAAAGTTGACTAACCTCGGGTACTTAGCACTTGGAGGGGGCAGCTTGGATAAGATACTAAGCGATGAGACACAAGCAGTTGCATTGGATTGGAGTAAAAGAATCAAAGTTGTTGAAGAACTTGCTTATACAATGGAGGTGACGGAGAAATGTGACGTTTATAGCTTTGGAGTGTTGGCTTTGGAAATAATTATGGGAAAGCATCCTAGAGATCTCATAATGTCCTATTTCTCATCATCGACATCTTCTGCAGTAGCACCAACAACAGCTGCTCATGATTTGGAAATGAAGGAAGTGTTAGACCAAAGGCTACCTTGTCCTCGAGGCTCTGTGGCCGAGAAGGTGATGTTGATTGCAAGAATAGCTTTTACTTGCTTGAATGAAAATCCACGTACTCGCCCAACCATGGATCAAGTATGTAAGGAGCTTTCCATTCCGTAG 516 0.4302 MGTLVKLARLHLGHNSFSGHIPPQIGKLTNLGYLALGGGSLDKILSDETQAVALDWSKRIKVVEELAYTMEVTEKCDVYSFGVLALEIIMGKHPRDLIMSYFSSSTSSAVAPTTAAHDLEMKEVLDQRLPCPRGSVAEKVMLIARIAFTCLNENPRTRPTMDQVCKELSIP 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele15g2374 171 Pfam Protein tyrosine and serine/threonine kinase 64 168 IPR001245 GO:0004672|GO:0006468
Lele15g2374 171 Gene3D Ribonuclease Inhibitor 1 63 IPR032675 -
Lele15g2374 171 SUPERFAMILY L domain-like 3 45 - -
Lele15g2374 171 PANTHER LEUCINE RICH REPEAT KINASE 2 65 169 - -
Lele15g2374 171 Gene3D Transferase(Phosphotransferase) domain 1 64 170 - -
Lele15g2374 171 SUPERFAMILY Protein kinase-like (PK-like) 65 168 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele15g2374 Lele-ChrLele15 27913463 27916029 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele15g2374 65 168 Receptor kinase-like Gene Family AT5G49660 38.095 8.85e-12 60.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Lele15g2374 PK_Tyr_Ser-Thr 2.6e-08 CL0016