Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele15g2300 ATGGCAGAGTGTATGCTTCAGATGAAGTTAGGCAATATTCAATTGATAGAGCTTAAGAACTTCTCTCTGGATCTTCCATTTCATTTCTGCAAAACTCATCTTCCACGCCATGATGAAACAATAACTGTAATAGATGAGGATGGGAACGAGTCTACTACCAAATATCTTGCTGATAAAACTGGTCTTAGTGGCGGTTGGCTAGGTTTCTCAATTCATCATGTCCAATTTCTGAACCTTCTCTCTTTGTATTCGATGTCTTCTGAAATAAAACTTCCCTCTTGA 282 0.383 MAECMLQMKLGNIQLIELKNFSLDLPFHFCKTHLPRHDETITVIDEDGNESTTKYLADKTGLSGGWLGFSIHHVQFLNLLSLYSMSSEIKLPS 93
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele15g2300 93 CDD B3_DNA 21 73 IPR003340 GO:0003677
Lele15g2300 93 Gene3D - 4 81 IPR015300 -
Lele15g2300 93 SUPERFAMILY DNA-binding pseudobarrel domain 21 73 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele15g2300 Lele-ChrLele15 26843293 26843717 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele15g2300 20 73 B3 DNA Binding Superfamily AT5G42700 59.259 3.17e-18 73.2