Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele15g2261 ATGAGACTATCTTCATCTAGTTTTAGCCCTCCACCTCCGGAAGGAGAAAAGCGAGTCCTGGATTCAGAACTTTGGCATGCATGCGCTGGCCCTCTTGTTTCCTTACCAGCAGTTGGAAGTCGTGTCGTCTACTTTCCTCAAGGTCACAGTGAACAGGTTGCTGCGTCTACCAACAAGGAAGTGGATGCCCATATTCCTAATTACCCTAGCTTGCCTCCGCAGCTTATTTGTCAGCTTCATAATGTGACCATGCATGCGGATGTGGAGACAGATGAAGTATATGCTCAGATGACCTTGCAAGCTCTAAATCCTCAAGAGCAGAAAGAGGCATACCTTCCAGCAGAGTTGGGCACTCCTAGTAAGCAGCCAACAAATTACTTCTGCAAAACTTTGACAGCCAGTGACACAAGCACACATGGGGGATTCTCTGTGCCACGCCGAGCAGCTGAGAAAGTTTTTCCATCTTTGGACTTCTCCCAACAACCTCCTTGTCAAGAGTTAATTGCTAGGGATTTGCATGGTAATGAATGGAAATTCAGACATATCTTTCGTGGTCAACCCAAAAGGCATCTACTTACAACAGGATGGAGTGTGTTTGTGAGTGCTAAAAGGCTTGTTGCTGGTGATTCAGTCCTGTTTATCTGGAATGAAAAGAATCAGTTGCTTCTTGGTATCCGGCGTGCAAATCGTCCACAAACTGTGATGCCTTCATCAGTGTTATCAAGTGATAGCATGCACTTGGGGCTTCTTGCTGCCGCTGCTCATGCAGCCGCAACAAACAGTCGTTTTACCATTTTCTATAATCCACGCGCTAGCCCATCTGAATTTGTCATACCCTTATTCAAGTATGTTAAAGCCGTGTATCATTCTCGAGTCTCAGTTGGCATGCGCTTCAGGATGCTGTTTGAAACTGAGGAATCAAGTGTGCGGAGATACATGGGCACCATAACTGGTATTAGTGACCTGGATCCTGTTCGATGGCCAAATTCACATTGGCGCTCAGTCAAGGTTGGCTGGGATGAATCTACAGCAGGAGAGAGGCAACCTAGAGTGTCCCTATGGGAAATTGAACCATTAACAACGTTTCCGATGTATCCATCATCTTTTCCTCTTAGGCTTAAACGACCATGGCCTCCAGGATTGCCTTCTTTCCAGGGCACGAAGGATGACAGTTTTAACTTAAGTAATCAACTATTATGGCTTCGAGACACCACAGACAGAGGTCTTCAGTCTCTTAACTTCCAGGGGTTTGGGTTCAATCCTTGGATGCAGCCAAGGCTCGATCCCTCCATGTTGACTTCGCCAACTGACATGTACCAAGCTATGGCTAATACTGCAGTTCCGGATATGAGGACTTTGGATCCTTCCAAACGGCATCCTTCATCTTTTCTTCAATTTCAGCAGCCACAGAACTTCCCCAATAGGACTGCTGCTTTAATGCAGGCCGAAATGTCCCAGCAGTCTCAACTGCAGCAGGCTTGTCAAAGCAATCAAGAGAATCAGAATTCTTCTCAATCCTTGGCTCCAACTCAGATGCAACTTCAGCAGCAGCACTCATTCAATAATCAGCATCAGCATCAGCAGCCACAGCAAGTGGTTGATCATCAGCAGATTTCAAGTGCCTCTGCAATGTCTCAGTTTGTATCTACTCCCCAACCCCATTCACCATCCATGCAAGCTATGTCTTCGCTTTGCCAACAGCAGAACTTTTCTGATTCAAACGTGAATTCCATGAATTCATCTATAGTTTCTCCCTTGCACAGTATCTTGGGTTCATTTTCCCAGGATGAATCATCCCACCTTCTCAACCTACCCAGGACTAGCTCTTGGGTACCTGTTCAAACATCCAATGCCTGGCCCTCCAAGCGTGTTGCAGTGGATCCTCTACTTTCTTCTGGAGCTTCTCAGTGCACTCTGCCTCAGTTGGAGTTGTTAGGGCAGCCACAAAGTACTATGTCACAGAATGTCATTTCGTTGCCACCTTATCCTGGTCGGGAGTGTTCAATAGACCAAGAAGGCAGCACTGATCCTCAGAACAATCTTTTATTTGGTGTCAATATAGAGCCCTCATCTCTTATAGTGCAGAATGGGATGCCAAGCCTCAAGGGAGTTGGCAACAACAATGGCTCTGGGATTGAGCCATTTCAGTCATCTAATTACCTGGATACTGCAGGAATTGATTCTTCATTGAATCATGGAATTACACATAGCATCGCTGAATCGAACTTCCTTGAGATTCCAGATGATGGGGGTCAAGGAAACCCACAAAACAAAACCTTTGTCAAGGTTTACAAGTCAGGGTCCTGTGGAAGATCATTGGATATCACTAAATTCAGCAGCTACCATGAGCTGCGTAGTGAACTTGCCCGAATGTTTGGCCTTGAAGGCAAGTTAGAGGACCCTGTGAGATCAGGCTGGCAGCTTGTATTTGTTGACCGAGAGAATGACGTTCTGCTCCTCGGTGATGGCCCCTGGCCGGAATTCGTAAGTAGTGTATGGTGTATCAAAATACTTTCTCCCCAAGATGTGCAGCAAATTGGCAACAATGGACTCGAGCTTCTGAACTCAGTCCCGATTCAGAGGCTCTCTAATGGCATCGGTGATGACCATGCGAGCCGTCCTGACCCAAGAAATTTAAGCACTGGGATGCAACCAATGGTGTGA 2664 0.4647 MRLSSSSFSPPPPEGEKRVLDSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAASTNKEVDAHIPNYPSLPPQLICQLHNVTMHADVETDEVYAQMTLQALNPQEQKEAYLPAELGTPSKQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSQQPPCQELIARDLHGNEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRANRPQTVMPSSVLSSDSMHLGLLAAAAHAAATNSRFTIFYNPRASPSEFVIPLFKYVKAVYHSRVSVGMRFRMLFETEESSVRRYMGTITGISDLDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSSFPLRLKRPWPPGLPSFQGTKDDSFNLSNQLLWLRDTTDRGLQSLNFQGFGFNPWMQPRLDPSMLTSPTDMYQAMANTAVPDMRTLDPSKRHPSSFLQFQQPQNFPNRTAALMQAEMSQQSQLQQACQSNQENQNSSQSLAPTQMQLQQQHSFNNQHQHQQPQQVVDHQQISSASAMSQFVSTPQPHSPSMQAMSSLCQQQNFSDSNVNSMNSSIVSPLHSILGSFSQDESSHLLNLPRTSSWVPVQTSNAWPSKRVAVDPLLSSGASQCTLPQLELLGQPQSTMSQNVISLPPYPGRECSIDQEGSTDPQNNLLFGVNIEPSSLIVQNGMPSLKGVGNNNGSGIEPFQSSNYLDTAGIDSSLNHGITHSIAESNFLEIPDDGGQGNPQNKTFVKVYKSGSCGRSLDITKFSSYHELRSELARMFGLEGKLEDPVRSGWQLVFVDRENDVLLLGDGPWPEFVSSVWCIKILSPQDVQQIGNNGLELLNSVPIQRLSNGIGDDHASRPDPRNLSTGMQPMV 887
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele15g2261 887 Gene3D - 125 228 IPR015300 -
Lele15g2261 887 MobiDBLite consensus disorder prediction 450 469 - -
Lele15g2261 887 ProSiteProfiles B3 DNA-binding domain profile. 127 229 IPR003340 GO:0003677
Lele15g2261 887 FunFam Auxin response factor 753 847 - -
Lele15g2261 887 Gene3D - 754 847 - -
Lele15g2261 887 MobiDBLite consensus disorder prediction 865 887 - -
Lele15g2261 887 Gene3D - 291 363 - -
Lele15g2261 887 Pfam AUX/IAA family 755 843 IPR033389 -
Lele15g2261 887 SMART B3_2 127 229 IPR003340 GO:0003677
Lele15g2261 887 SUPERFAMILY DNA-binding pseudobarrel domain 112 256 IPR015300 -
Lele15g2261 887 FunFam Auxin response factor 291 363 - -
Lele15g2261 887 MobiDBLite consensus disorder prediction 481 559 - -
Lele15g2261 887 Pfam Auxin response factor 253 336 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Lele15g2261 887 SUPERFAMILY CAD & PB1 domains 755 833 - -
Lele15g2261 887 ProSiteProfiles PB1 domain profile. 758 842 IPR000270 GO:0005515
Lele15g2261 887 Pfam B3 DNA binding domain 127 228 IPR003340 GO:0003677
Lele15g2261 887 CDD B3_DNA 126 227 IPR003340 GO:0003677
Lele15g2261 887 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 17 847 IPR044835 GO:0003677|GO:0006355|GO:0009725
Lele15g2261 887 FunFam Auxin response factor 125 229 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele15g2261 Lele-ChrLele15 26022600 26028114 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele15g2261 1 484 B3 DNA Binding Superfamily AT1G30330 83.640 0.0 814
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Lele15g2261 B3 1.4e-22 CL0405