Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele15g2235 ATGCAGCATAGGAATATTGTTAGGTTACAGGATGTAGTACACGGTGAGAAGCGTTTGTACCTGGTTTTTGAGTACCTGGACCTGGATCTGAAGAAGCACATGGATTCGTCTCCTGATTTTGCAAAAGATCATCGACAAATAAAAATGTTTCTTTATCAAATTCTCTGCGGCATTGCTTACTGTCATTCACATAGAGTTCTTCATCGAGACTTGAAACCACAGAATTTGTTGATAGATCTCCGAAGTAATTCACTGAAGCTTGCAGATTTTGGATTGGCCAGGGCATTTGGTATTCCTGTCAGAACATTTACACATGAGGTGGTGACACTATGGTACAGAGCACCAGAAATATTGCTTGGATCTCGCCAGTATTCTACCCCAGTTGATGTTTGGTCAGTAGGCTGTATATTTGCAGAGATGTTTAACCTGCGACCACTCTTTCCTGGAGACTCTGAGATTGATGAATTGTTTAAGATATTCAGGATAATGGGAACGCCAAATGAGGATACATGGCCTGGAGTGACTTCTTTGCCTGATTTTAAATCAGCCTTCCCAAAGTGGCCTCCAAAGGACCTGGCAACTGTGGTTCCAAATCTTGAGCCAGCTGGCATCGATCTTCTTTCTAGTATGCTTTGCTTGGATCCCAGCAGAAGAATTACAGCCAGGAATGCTCTTGAGCATGAGTACTTCAAAGACATTAAGTTTGTCCCCTGA 714 0.4258 MQHRNIVRLQDVVHGEKRLYLVFEYLDLDLKKHMDSSPDFAKDHRQIKMFLYQILCGIAYCHSHRVLHRDLKPQNLLIDLRSNSLKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRQYSTPVDVWSVGCIFAEMFNLRPLFPGDSEIDELFKIFRIMGTPNEDTWPGVTSLPDFKSAFPKWPPKDLATVVPNLEPAGIDLLSSMLCLDPSRRITARNALEHEYFKDIKFVP 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele15g2235 237 Gene3D Transferase(Phosphotransferase) domain 1 29 235 - -
Lele15g2235 237 Gene3D Phosphorylase Kinase; domain 1 1 27 - -
Lele15g2235 237 ProSitePatterns Serine/Threonine protein kinases active-site signature. 66 78 IPR008271 GO:0004672|GO:0006468
Lele15g2235 237 ProSiteProfiles Protein kinase domain profile. 1 230 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele15g2235 237 PANTHER CELL DIVISION PROTEIN KINASE 2 230 - -
Lele15g2235 237 SMART serkin_6 2 230 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele15g2235 237 SUPERFAMILY Protein kinase-like (PK-like) 2 233 IPR011009 -
Lele15g2235 237 Pfam Protein kinase domain 1 230 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele15g2235 237 FunFam Cell division control protein 2 homolog 29 235 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele15g2235 Lele-ChrLele15 23395387 23405870 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele15g2235 1 237 Core Cell Cycle Gene Families AT3G48750 82.278 2.21e-148 414
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-Pl Lele15g2235 Pkinase 1.8e-60 CL0016