Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele15g2233 ATGTGCAGCAGCATCTTTGGCTCAATAATCATGGACAACAATTATCATCAGGGCGATTTAACTGACATATTCCATGCGAGTAGTGACGGTGGCGGCCGCGGTGGTGGCCGAGGCAGAGGAGGAGGTGGTGGTGCTTCATATGGTACTTCTTCTTCTTCTACATCTGAATTAGCTCCTCATGATCTCTCTTCTTCATCGGAAAGTTGGCAGCAGCATCATCACCAGCACCAGCACCACCAGATTAATTTCTCTTCTGTAATAATGGAAGATTCTCTTAGAGCCAGCAACTTCTTCGGCGATCCCTTCTCGAACATGCGAGATCCCTTTCTTCAAGACCTTGATTTCCCCTTACCTTCTTCCTACTTCAGTTCTGCTACTAATAATTCTGTCATGGAAGATGCATCTCCTGGTTTCTCTTCTTCTTCTGTTGTTAATTTGTCTCATCGCAACAAGCTTGTAGAAGATGATATAAGAATTAGGCCTCCTACTACAGCAGCTTGTAACAATACCACCACCATATTCTCCAACATGATTCAGATATCCCCCAACAGTATGAACGCCGCCGCCGCCAAGTTACCGCCGCCCGTGGTTTCGCCGTGTGATTCTTCTCCGGTGAATCTGGCCGCCGTGAATTCTTCGTCTTCGTCGTCGGTGCCGAGGGTAATTGAGCCTTCTTCTTCTTCGGTTTCTGCAGGCAACATGAATATCACTGTGGACAACGCGGCAGTGCAGATCTCGTCGCCAAGGAATCCGGGTCTCAAGCGAAGAAAGAGCCAGGCGAAGAAGGTGGTATGTATACCTGCGCCAGCAGCTGCAAATAGCAGGCCAAGTAGTGGAGAGGTAGTTCCTTCTGATTTGTGGGCTTGGAGAAAGTACGGTCAGAAACCCATCAAAGGTTCTCCATATCCAAGATGCAGCAGTTCCAAGGGTTGTTCAGCGAGAAAACAAGTAGAGAGAAGCAGGACAGACCCAAACATGCTGGTCATCACTTACACTTCAGAGCACAACCATCCATGGCCGACTCAACGAAACGCCCTCGCCGGCTCAACCCGGTCTCAGCCTTCCAACAACAATAACAACAACGCTCCTTCCAAGAACAACAGCAACAATTCCGATCAAGCTTCGATTCAGCCGCCCCGAGACGGCAGCGGCAACATGAAGCTGAAGGAGGAGGAGGAGGATCATCATCATCAACAAGATGATCAGAGAGGGAAGAGCTCAGCATCATCAGTTAAGGAGGAGATGGATATAATGGAGATGGAAGATATAACAGAGATGAACCAGAACGAACATGAGCTTGAGAATATGATGATGGAAGATGATAATACGGAAGGAAGAGGAGTGGGATACAAGCCATGTATGGTGGAGAGCAATAATAATAATCAGACGTCTGAGGATTTCTTTGCAGAATTGGGAGAGATTGAAGCTGACCCACTGAATCTCTTGTTCACTCAAGCGGGTTACAATGAAGATCAGCATCAGAGAGAATCAGCTTTAGATCCTTTCAATATCTTTGACTGGTCATCATCATCATCTGCATCAGCAGATATTCACAACAAATTTGAAGAACCAAAGAGAGGGTTATAA 1587 0.4694 MCSSIFGSIIMDNNYHQGDLTDIFHASSDGGGRGGGRGRGGGGGASYGTSSSSTSELAPHDLSSSSESWQQHHHQHQHHQINFSSVIMEDSLRASNFFGDPFSNMRDPFLQDLDFPLPSSYFSSATNNSVMEDASPGFSSSSVVNLSHRNKLVEDDIRIRPPTTAACNNTTTIFSNMIQISPNSMNAAAAKLPPPVVSPCDSSPVNLAAVNSSSSSSVPRVIEPSSSSVSAGNMNITVDNAAVQISSPRNPGLKRRKSQAKKVVCIPAPAAANSRPSSGEVVPSDLWAWRKYGQKPIKGSPYPRCSSSKGCSARKQVERSRTDPNMLVITYTSEHNHPWPTQRNALAGSTRSQPSNNNNNNAPSKNNSNNSDQASIQPPRDGSGNMKLKEEEEDHHHQQDDQRGKSSASSVKEEMDIMEMEDITEMNQNEHELENMMMEDDNTEGRGVGYKPCMVESNNNNQTSEDFFAELGEIEADPLNLLFTQAGYNEDQHQRESALDPFNIFDWSSSSSASADIHNKFEEPKRGL 528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele15g2233 528 Pfam WRKY DNA -binding domain 285 338 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele15g2233 528 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 166 482 IPR044810 GO:0003700
Lele15g2233 528 Gene3D WRKY domain 256 333 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele15g2233 528 FunFam probable WRKY transcription factor 14 256 333 - -
Lele15g2233 528 ProSiteProfiles WRKY domain profile. 278 340 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele15g2233 528 SUPERFAMILY WRKY DNA-binding domain 281 340 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele15g2233 528 MobiDBLite consensus disorder prediction 509 528 - -
Lele15g2233 528 MobiDBLite consensus disorder prediction 26 77 - -
Lele15g2233 528 SMART WRKY_cls 283 339 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele15g2233 528 MobiDBLite consensus disorder prediction 297 412 - -
Lele15g2233 528 MobiDBLite consensus disorder prediction 384 412 - -
Lele15g2233 528 MobiDBLite consensus disorder prediction 323 380 - -
Lele15g2233 528 MobiDBLite consensus disorder prediction 45 70 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele15g2233 Lele-ChrLele15 22704106 22707722 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele15g2233 96 508 WRKY Transcription Factor Family AT1G30650 43.192 5.80e-74 239
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lele15g2233 WRKY 2.3e-18 CL0274